TABLE 1.
Characteristic | A. tumefaciens C58 | A. radiobacter K84 | A. vitis S4 |
---|---|---|---|
Biovariant | Biovar I | Biovar II | Biovar III |
Genome size (bp) | 5,674,260 | 7,273,300 | 6,320,946 |
% G+C content | 59.0 | 59.9 | 57.5 |
No. of chromosomesa | 2 | 1 | 2 |
No. of plasmids | 2 | 4b | 5 |
No. of indicated protein-coding genes | |||
Total | 5,385 | 6,752 | 5,479 |
With functionality assigned | 3,516 | 5,099 | 3,897 |
Conserved hypothetical | 1,287 | 1,201 | 1,282 |
Hypothetical | 582 | 452 | 300 |
Pseudogenes | 28 | 68 | 90 |
No. of indicated RNA genes | |||
rRNA operons | 4 | 3 | 4 |
tRNAs | 56 | 51 | 54 |
Other RNAsc | 26 | 23 | 30 |
Genomic islands | |||
Total no. | 38 | 59 | 20 |
Avg size (kb) | 23.3 | 28.2 | 33.0 |
A chromosome is defined here as a replicon harboring rRNA operons and essential genes.
The 2.65-Mbp replicon, which does not meet our definition of a chromosome, is included here (see Results).
Includes transfer-messenger RNAs, signal recognition particle RNAs, suhB, riboswitches, and miscellaneous features.