TABLE 2.
Genome group | No. of SNPs | SNP group |
---|---|---|
B. suis Thomsen | 3 | 1 |
B. suis 686 | 577 | 2 |
B. suis 40 | 184 | 3 |
B. suis 23445 | 3 | 6 |
B. suis Thomsen + B. suis 23445 | 2,370 | 7 |
B. suis 1330 | 739 | 10 |
B. ovis 25840 | 3,945 | 15 |
B. melitensis Ether | 1,303 | 19 |
B. melitensis 63-9 | 908 | 27 |
B. melitensis 16M | 1,363 | 32 |
B. melitensis 16M + B. melitensis 63-9 | 43 | 41 |
B. melitensis 16M + B. melitensis 63-9 + B. melitensis Ether | 1,666 | 42 |
B. canis 23365 | 253 | 54 |
B. canis 23365 + B. suis 40 | 429 | 55 |
B. canis 23365 + B. suis 40 + B. suis 686 | 584 | 56 |
B. canis 23365 + B. suis 40 + B. suis 686 + B. suis 1330 | 893 | 61 |
All B. suis + B. canis | 865 | 63 |
All B. suis + B. canis + B. ovis | 968 | 69 |
B. abortus 2308 + B. abortus 9-941 + B. abortus S19 | 2,295 | 98 |
B. abortus S19 | 46 | 107 |
B. abortus 9-941 | 91 | 130 |
B. abortus S19 + B. abortus 2308 | 43 | 139 |
B. abortus 2308 | 41 | 143 |
Total | 19,612 |
The entire data set of 20,154 SNPs was used without any mismatch cutoff, indicating that 542 SNPs did not fall into these groupings. The SNP group is an arbitrary assignment number that designates each genome grouping and is based on information presented in Table S1 in the supplemental material.