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. 2009 Feb 25;83(9):4338–4344. doi: 10.1128/JVI.02574-08

TABLE 1.

Data collection and refinement statistics

Data collecteda Value(s)
Resolution (Å) 50.0-3.5 (3.63-3.50)
Rmerge 0.223 (0.783)
II 13.25 (1.64)
% Completeness 98.7 (92.0)
Redundancy 12.1 (7.1)
Refinement
    Resolution (Å) 25-3.5
    No. of reflections (working set) 6,475
    No. of reflections (test set) 311
    Rwork, Rfree 0.2084, 0.2967
    No. of protein atoms 2,905
Avg B factors (residual after TLS refinementb)
    Protein (Å2) 63
    Chloride ion, water (Å2) 19
RMS deviations (geometry)
    Bond length (Å) 0.0179
    Bond angle (°) 1.69
a

Rmerge, Σh,k,lΣi|Ii(hkl) − 〈I(hkl)〉|/Σh,k,lΣiIi(hkl), where I is an intensity that is observed i times; II, signal-to-noise ratio (average observed intensity divided by average standard deviation of the observed intensity); Rwork, Σh,k,l||Fobs| − |Fcalc||/Σh,k,l|Fobs|, where h, k, l cover the “working set” of observed structure factor amplitude (Fobs) reflections used in refinement (all reflections minus the test set) and Fcalc is the calculated structure factor amplitude; Rfree, Σh,k,l||Fobs| − |Fcalc||/Σh,k,l|Fobs|, where h, k, l cover the “test set,” 5% of randomly selected Fobs reflections sequestered before refinement and not used in refinement; RMS, root mean square. Values for the highest-resolution shell (3.63 to 3.50 Å) are shown in parentheses.

b

See the Protein Data Bank entry for TLS tensor refinement parameters.

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