Table 1.
List of primers for amplification and full double-stranded sequence coverage of the entire mtDNA codR
Name | Sequence 5' | Corresponding fragment | |
PCR | FampA | AAATCTTACCCCGCCTGTTT | A |
PCR | RampA | AATTAGGCTGTGGGTGGTTG | A |
PCR | FampB | GCCATACTAGTCTTTGCCGC | B |
PCR | RampB | GGCAGGTCAATTTCACTGGT | B |
1 | F1 | CCGCTTCTGGCCACAGCACT | B |
2 | F2 | GGTTGGTCAATTTCGTGCCAG | B |
3 | R1 | ACTTGGGTTAATCGTGTGACC | B |
4 | F3 | CATCAAGCACGCAGCAATG | B |
5 | F4 | CTCACCACCTCTTGCTCAGC | B |
6 | F5 | CTTGACCGCTCTGAGCTAAAC | B |
7 | F6 | AAGCTAAGACCCCCGAAACC | B |
8 | F7 | AAACCTACCGAGCCTGGTG | B |
9 | F8 | GAGGAACAGCTCTTTGGACAC | B |
10 | F9 | TCGTCCCAACAATTATATTACTACCA | B |
11 | R2 | CTGTTTGTCGTAGGCAGATGG | B |
12 | F10 | AACGCCACTTATCCAGTGAACC | B |
13 | F11 | GACTCCCTAAAGCCCATGTCG | B |
14 | F12 | CATCTGCCTACGACAAACA | B |
15 | F13 | ACAGCCATTCTCATCCAAACCC | B |
16 | F14 | AACCACGTTCTCCTGATCAAA | B |
17 | R3 | GATATCGCCGATACGGTTG | B |
18 | R4 | AGCGGATGAGTAAGAAGATTCC | B |
19 | R5 | TTGAAGAAGGCGTGGGTACAG | B |
20 | F15 | TTCATCCCTGTAGCATTGTTCG | B |
21 | F16 | TTGCTCATCAGTTGATGATACG | B |
22 | F17 | CACTCTGTTCGCAGCAGTATG | B |
23 | F18 | CATCATCGAAACCGCAAAC | B |
24 | F19 | TTTCTCCAACATACTCGGATTC | B |
25 | F20 | ACAAACAATGGTCAACCAGTAAC | B |
26 | F21 | TCCAAAGACAACCATCATTCC | B |
27 | R6 | TTATCGGAATGGGAGGTGATTC | B |
28 | F22 | TACTCACCAGACGCCTCAACCG | B |
29 | F23 | AGTCCCACCCTCACACGATTC | B |
30 | F24 | CGCCTACACAATTCTCCGATC | B |
31 | R7 | CGGTTGTTGATGGGTGAGTC | B |
32 | F25 | AAATGGGCCTGTCCTTGTAG | B |
33 | R8 | TCATAAGGGCTATCGTAGTTTTC | B |
34 | F26 | GTGGCAAGAAATGGGCTAC | B |
35 | F27 | AACATATAACTGAACTCCTCACACC | B |
36 | F28 | GCCGCAGTACTCTTAAAACTAGG | B |
37 | F29 | AGGACTCAACATACTAGTCACAGC | B |
38 | F30 | GCCATACTAGTCTTTGCCGC | B |
39 | R9 | GCTGTGTTGGCATCTGCTC | B |
40 | F31 | AAAGACCACATCATCGAAACC | B |
41 | F32 | CTAACAGGTCAACCTCGCTTCC | B |
42 | F33 | CCTTCATAAATTATTCAGCTTCCT | B |
43 | F34 | CAATGATATGAAAAACCATCGTT | B |
44 | R10 | GGATGGCGGATAGTAAGTTTGT | B |
45 | F35 | CAGGGTTGGTCAATTTCGT | B |
46 | F36 | AATGGTTTGGCTAAGGTTGT | B |
47 | R11 | ACGAACAATGCTACAGGGATG | B |
48 | F37 | GGCATTATCCTCCTGCTTGCAACTAT | B |
49 | R12 | ATGTCCTGATCCAACATCGAG | A |
50 | R13 | AGAAGAGCGATGGTGAGAGC | A |
51 | F38 | CGACCTCGATGTTGGATCAGGACA | A |
52 | F39 | AGATGGCAGAGCCCGGTAATC | A |
53 | F40 | ACTACAACCCTTCGCTGACG | A |
54 | F41 | CCCTAGCATTACTTATATGATATGTCTCCATACCCATTACAATCTCC | A |
55 | F42 | TCAGGCTTCAACATCGAATACG | A |
56 | F43 | CCCATCCTAAAGTAAGGTCAGC | A |
57 | F44 | CCCTTTCACTTCTGAGTCCCAG | A |
58 | F45 | CACCATCACCCTCCTTAACC | A |
59 | R14 | GCTGAGTGAAGCATTGGACTG | A |
60 | F46 | TAAGCACCCTAATCAACTGGC | A |
61 | R15 | ATAGTGATGCCAGCAGCTAGG | A |
62 | F47 | CGCATCTGCTATAGTGGAGG | A |
63 | R16 | TTTCATGTGGTGTATGCATCG | A |
64 | F48 | GCCATAACCCAATACCAAACG | A |
65 | F49 | GAGGCTTCATTCACTGATTTCC | A |
66 | R17 | GGGCAGGATAGTTCAGACGG | A |
67 | F50 | TTCCCACAACACTTTCTCGGCC | A |
68 | R18 | AAGTTAGCTTTACAGTGGGCTCTAG | A |
69 | F51 | CGGTCAATGCTCTGAAATCTGTG | A |
70 | F52 | CTGTTCGCTTCATTCATTGCC | A |
71 | R19 | GTGGCGCTTCCAATTAGGTG | A |
72 | R20 | GTGCTTTCTCGTGTTACATCG | A |
73 | R21 | GAAAGTTGAGCCAATAATGACG | A |
74 | F53 | TTTCACTTCCACTCCATAACGC | A |
75 | F54 | CCTGATACTGGCATTTTGTAGATGTGG | A |
76 | F55 | ACTACCACAACTCAACGGCTAC | A |
77 | F56 | CTAACCGTGCAAAGGTAGCA | A |
78 | F57 | GCAATTCCCGGACGTCTAAACCAAA | A |
79 | F58 | GCCATAATATGATTTATCTCCACA | A |
80 | F59 | AAACCCTCGTTCCACAGAA | A |
81 | F60 | GATGAATAATAGCAGTTCTACCGT | A |
82 | F61 | CAACGTAAAAATAAAATGACAGTT | A |
83 | F62 | ATATGAAAATCACCTCGGAGC | A |
84 | R22 | AGTTACAATATGGGAGATTATTCC | A |
85 | F63 | CGCAAGTAGGTCTACAAGACG | A |
86 | F64 | CTAATCTTCAACTCCTACATACTTCC | A |
87 | R23 | ATCTGTTTTTAAGCCTAATGTGG | A |
88 | F65 | AAGATTAAGAGAACCAACACCTCT | A |
89 | F66 | AACAACCGACTAATCACCACCCAACAATG | A |
90 | F67 | TCATCTTCACAATTCTAATTCTACTG | A |
91 | F68 | TCGAGTCTCCCTTCACCATT | A |
92 | F69 | CGGCTTCGACCCTATATCC | A |
93 | R24 | GGTAAAAGGAGGGCAATTTCT | A |
94 | F70 | CTACTCTCATAACCCTCAACACC | A |
95 | F71 | ATTAAACCAGACCCAGCTACG | A |
96 | F72 | AGCATATTTCACCTCCGCTAC | A |