TABLE 3.
In silico analysis of CpMuc1-7 gene products
Gene product | CryptoDB gene ID | No. of amino acids | Predicted molecular mass (Da) | Amino acid composition (%)
|
No. of O-glycosylation sitesa | No. of N-glycosylation sitesa | Signal peptide or signal anchorb | % Identity to ChMuc | ||
---|---|---|---|---|---|---|---|---|---|---|
Proline | Serine | Threonine | ||||||||
CpMuc1 | cgd2_390 | 155 | 17,437 | 7.74 | 10.32 | 7.1 | 3 | 0 | Anchor | 81.3 |
CpMuc2 | cgd2_400 | 194 | 21,040 | 7.73 | 16.5 | 10.3 | 30 | 0 | Peptide | 83 |
CpMuc3 | cgd2_410 | 261 | 28,170 | 7.28 | 27.59 | 3.45 | 50 | 0 | Anchor | 82.5 |
CpMuc4 | cgd2_420 | 205 | 22,008 | 9.76 | 14.63 | 3.9 | 9 | 0 | Peptide | 56.3 |
CpMuc5 | cgd2_430 | 206 | 21,176 | 14.56 | 19.9 | 4.85 | 36 | 1 | Peptide | 71 |
CpMuc6 | cgd2_440 | 134 | 15,314 | 10.45 | 11.94 | 3 | 1 | 0 | Anchor | 77.8 |
CpMuc7 | cgd2_450 | 182 | 19,345 | 6.04 | 17.03 | 5.5 | 10 | 0 | Peptide | 79 |
As predicted by the NetOGlyc (18) and NetNGlyc (http://www.cbs.dtu.dk/services/NetNGlyc) programs.
As predicted by the SignalP 3.0 program (6).