Table 4.
Average Values of the Indices J,R, and FM and of the Probability pJ, pR, and pFM that a Values Higher than the One that is Observed Might be Obtained by Chance. Standard Deviations of the Mean are Reported in Parentheses
| Method | J | R | FM | pJ | pR | pFM |
|---|---|---|---|---|---|---|
| baker | 0.80(0.02) | 0.82(0.02) | 0.88(0.01) | 39(4) | 35(4) | 37(4) |
| chop | 0.66(0.03) | 0.70(0.03) | 0.79(0.02) | 66(5) | 63(5) | 63(5) |
| chophomo | 0.66(0.03) | 0.69(0.03) | 0.79(0.02) | 67(5) | 65(5) | 64(5) |
| distill | 0.70(0.02) | 0.73(0.02) | 0.82(0.01) | 58(4) | 56(4) | 55(4) |
| domfold | 0.76(0.02) | 0.77(0.02) | 0.86(0.01) | 49(5) | 48(5) | 46(5) |
| domssea | 0.76(0.03) | 0.78(0.02) | 0.86(0.02) | 50(5) | 48(5) | 48(5) |
| dps | 0.74(0.03) | 0.77(0.02) | 0.84(0.02) | 55(5) | 52(5) | 52(5) |
| foldpro | 0.82(0.02) | 0.84(0.02) | 0.90(0.01) | 34(4) | 32(4) | 31(4) |
| hhpred1 | 0.77(0.02) | 0.78(0.02) | 0.86(0.01) | 46(4) | 45(4) | 42(4) |
| hhpred3 | 0.76(0.02) | 0.78(0.02) | 0.86(0.01) | 46(4) | 45(4) | 43(4) |
| maopus | 0.80(0.02) | 0.83(0.02) | 0.88(0.01) | 42(5) | 36(5) | 39(5) |
| metadp | 0.76(0.03) | 0.77(0.03) | 0.86(0.02) | 49(5) | 48(5) | 46(5) |
| NNput | 0.71(0.02) | 0.73(0.02) | 0.83(0.01) | 56(4) | 55(4) | 53(4) |
| robetta | 0.79(0.02) | 0.81(0.02) | 0.87(0.01) | 40(4) | 36(4) | 37(4) |