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. Author manuscript; available in PMC: 2010 Apr 15.
Published in final edited form as: Gene. 2009 Jan 21;435(1-2):53–62. doi: 10.1016/j.gene.2008.12.019

Table 1.

Primers used for the cloning and quantitative RT-PCR.

Name Sequence
Cloning
 NotI-pGL(7)F 5′-ttctGCGGCCGCactggccggtacctgagctc-3′
 BamHI-pGL(2031)R 5′-cgcaaacGGATCCttatcgat-3′
 SacI-hTPH2(1)F 5′-tgagGAGCTCcattgctcttcagcaccagg-3′
 SacI-hTPH2(61)F 5′-atcgGAGCTCccttcctctcaatctccg-3′
 SacI-hTPH2(99)F 5′-tactGAGCTCctagtaccccctgctgca-3′
 XhoI-hTPH2(53)R 5′-agagCTCGAGgatcagctgcctgcttgg-3′
 XhoI-hTPH2(78)R 5′-gcagCTCGAGcggagattgagaggaagg-3′
 XhoI-hTPH2(116)R 5′-attcCTCGAGtgcagcagggggtactag-3′
 XhoI-hTPH2(141)R 5′-ctggCTCGAGggatcccggtgtaatattctttc-3′
 XhoI-hTPH2(1)F 5′-tgagCTCGAGcattgctcttcagcaccagg-3′
 SacI-hTPH2(141)R 5′-ctggGAGCTCggatcccggtgtaatattctttc-3′
 hTPH2(117)F* 5′-CgagaaagaatattacaccgggatccC-3′
 hTPH2(141)R* 5′-TCGAGggatcccggtgtaatattctttctcGAGCT-3′
qRT-PCR
 Rluc(735)F 5′-gataactggtccgcagtggt-3′
 Rluc(957)R 5′-accagatttgcctgatttgc-3′
 Fluc(594)F 5′-caccttcgtgacttcccatt-3′
 Fluc(761)R 5′-tgactgaatcggacacaagc-3′
*

5′-phosphorylated linker. Upper case - designed to introduce the restriction site. Numbers in the parentheses represent the starting positions in target sequences (hTPH2, pGL4.14, and pRL-SV40). Positions in hTPH2 are relative to the transcription start site (TSS), while those in the reporter vectors are based on the sequences of pGL4.14 (AY864928, Fluc) and pRL-SV40 (AF025845, Rluc), respectively.