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. 2009 May 8;5(5):e1000468. doi: 10.1371/journal.pgen.1000468

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Higasa et al.

This is an open-access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are properly credited.

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XDiHH values of ancestral and derived alleles for PHASEd-piCHM vs. CHM are shown in the top two panels. The bottom two panels show the switch error (sw) rate, and recombination rate for the same 100 kb bin, respectively. The MHC locus is shown in gray. The recombination rate for the whole HapMap II population was obtained from HapMap [1],[31]. See text for details.