Table 2. Geographic origin of human and rodent sources of hantaviruses, Brazil, 1999–2005.
Composite taxon* | City | State | Region | Amplicon† |
---|---|---|---|---|
PR_DF_Hsp_19 | Paranoá | Distrito Federal | Central Plateau | N |
SS_DF_Nlas_13 | São Sebastião | Distrito Federal | Central Plateau | Gn |
SS_DF_Nlas_10 | São Sebastião | Distrito Federal | Central Plateau | Gn, N |
SS_DF_Nlas_11 | São Sebastião | Distrito Federal | Central Plateau | Gn, N |
SS_DF_Nlas_12 | São Sebastião | Distrito Federal | Central Plateau | Gn, N |
CO_GO_Hsp_20 | Cocalzinho | Goiás | Central Plateau | Gn |
AR_SP_Hsp_21 | Araxá | Minas Gerais | Central Plateau | Gn, N |
SG_MG_Nlas_8 | São Gotardo | Minas Gerais | Central Plateau | Gn, N |
SG_MG_Nlas_9 | São Gotardo | Minas Gerais | Central Plateau | Gn, N |
AG_SP_Ost_1 | Aguaí | São Paulo | Southeast | Gn, N |
BA_SP_Hsp_2 | Batatais | São Paulo | Southeast | Gn, N |
BA_SP_Hsp_1 | Batatais | São Paulo | Southeast | Gn, N |
CJ_SP_Hsp_3 | Cajurú | São Paulo | Southeast | Gn, N |
CJ_SP_Hsp_4 | Cajurú | São Paulo | Southeast | N |
CC_SP_Hsp_5 | Cássia dos Coqueiros | São Paulo | Southeast | Gn, N |
CC_SP_Hsp_6 | Cássia dos Coqueiros | São Paulo | Southeast | Gn, N |
CC_SP_Nlas_2 | Cássia dos Coqueiros | São Paulo | Southeast | Gn, N |
CC_SP_Nlas_3 | Cássia dos Coqueiros | São Paulo | Southeast | Gn, N |
CC_SP_Nlas_4 | Cássia dos Coqueiros | São Paulo | Southeast | Gn, N |
CC_SP_Nlas_1 | Cássia dos Coqueiros | São Paulo | Southeast | Gn, N |
CC_SP_Nlas_5 | Cássia dos Coqueiros | São Paulo | Southeast | Gn, N |
CV_SP_Hsp_7 | Cravinhos | São Paulo | Southeast | Gn, N |
GU_SP_Hsp_9 | Guariba | São Paulo | Southeast | N |
GU_SP_Hsp_8 | Guariba-SP | São Paulo | Southeast | Gn, N |
IB_SP_Nlas_6 | Ibaté | São Paulo | Southeast | Gn, N |
IB_SP_Nlas_7 | Ibaté | São Paulo | Southeast | Gn, N |
JD_SP_Hsp_10 | Jardinópolis | São Paulo | Southeast | Gn, N |
JU_SP_Hsp_11 | Jaú | São Paulo | Southeast | Gn, N |
PO_SP_Hsp_12 | Pontal | São Paulo | Southeast | Gn |
RB_SP_Hsp_13 | Ribeirão Bonito | São Paulo | Southeast | Gn, N |
RP_SP_Ako_1 | Ribeirão Preto | São Paulo | Southeast | Gn, N |
SC_SP_Hsp_14 | São Carlos | São Paulo | Southeast | Gn, N |
SE_SP_Hsp_15 | Sertãozinho | São Paulo | Southeast | Gn, N |
ST_SP_Hsp_17 | Sertãozinho | São Paulo | Southeast | Gn, N |
ST_SP_Hsp_16 | Sertãozinho | São Paulo | Southeast | Gn, N |
TB_SP_Hsp_18 | Taubaté | São Paulo | Southeast | Gn, N |
SE_SC_Oni_1 | Seara | Santa Catarina | South | Gn |
CX_RS_Hsp_22 | AY740623 | Rio Grande do Sul | South | Gn, N |
*The first 2 letters indicate the city, the next 2 the state, and the next 3 the animal source (Hsp, human; Nlas, Necromys lasiurus; Ost, Oligoryzomys stramineus; Ako, Akodon sp.; Oni, O. nigripis). Numbers indicate sample number. †N, nucleocapsid; Gn, glycoprotein.