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. 2009 May 8;5(5):e1000419. doi: 10.1371/journal.ppat.1000419

Table 2. Crystallographic data.

Dataset Native Seleno-Methionine Derivative
Space group/cell constants (a and c, in Å) P42212/93.74; 113.73 P42212/93.64; 113.77
Number of measurements/unique reflections 613,987/47,568 320,816/29,379
Resolution range (Å) (outermost shell) 48.6–1.80 (1.90–1.80) 48.6–2.11 (2.22–2.11)
Completeness (%) 100.0 (99.9) 98.4 (89.2)
Rr.i.m. ( = Rmeas)/Rp.i.m a , b , c 0.101(0.696)/0.028(0.190) 0.081(0.224)/0.027(0.089)
Average intensity over st. dev. (<[<I>/σ(<I>)]>) 23.0 (4.2) 23.9 (7.3)
B-factor (Wilson) (Å2)/average multiplicity 17.6/12.9 (13.1) 21.0/10.9 (5.9)
Heavy-atom sites used for phasing/fom d 9/0.68, 0.84
Resolution range used for refinement (Å) 48.6–1.80
Number of reflections used (test set) 46,847 (720)
Crystallographic Rfactor (free Rfactor)e 0.160 (0.187)
No. of protein atomsf/solvent molecules/ligands/ions 2,870/432/2 heme (with Fe3+); 6 glycerols/5 SO4 2−
Rmsd from target values
bonds (Å)/angles (°) 0.012/1.31
bonded B-factors (main chain/side chain) (Å2) 0.70/2.19
Average B-factors for protein atoms (Å2) 14.1
Main-chain conformational angle analysis for residues in favored regions/outliers/all residues 349/0/360
a

Friedel mates were treated as independent reflections in the derivative dataset.

b

Values in parentheses refer to the outermost resolution shell.

c

Inline graphic and Inline graphic.

d

Mean figure or merit computed for data to 1.8 Å before and after density modification with program DM within CCP4.

e

Crystallographic Rfactor = Σhkl ||Fobs| − k |Fcalc||/Σhkl |Fobs|; free Rfactor, same for a test set of reflections not used during refinement.

f

Including atoms in alternate conformation.