Table 1. Primers for the RS1 mutation analysis.
Gene | Usage | Exon | Primer (5′→3′) |
---|---|---|---|
RS1 |
PCR and sequencing |
1 |
F: GGTTAACTTGATGGGGCTCA |
R: CCCATCCTGTTTTCTGTTGG | |||
2 |
F: TTCTTCCAGAAGGGGTGTTG |
||
R: AAGCGATTCTCTTGCCTCAG | |||
3 |
F: TCAATTTGGCCATTGTAGCA |
||
R: GGAGAAAACCCGCATTAACA | |||
4 |
F: TGAACCGTTGAAGACACAGC |
||
R: AGTGCAGTGGTGTGATCTCG | |||
5 |
F: TTTCTTGGGAGGTGGAGATG |
||
R: GCAGATGATCCACTGTGCTG | |||
6 |
F: GTTCCAGATGTCCCAAGCAT |
||
R: TGCGAAATATAGCCCTGTCC | |||
RS1 |
Gene dosage |
1 |
F: GGGAAGATGTCACGCAAGAT |
R: AACTGGAAAGCCATCCACAC | |||
2 |
F: GCCACATTGGGATTATCGTC |
||
R: TGTTGGGATTACAGGCATGA | |||
3 |
F: AACCACAGTTGCCTTTGACC |
||
R: TGTTCCCAATGACTGTTCCA | |||
4 |
F: CAGTCACCTGGTGCTTGTTG |
||
R: CGAAGAATACCAGCCCACAT | |||
5 |
F: TTTCTTGGGAGGTGGAGATG |
||
R: TGTCCTGGAACTTGGAGAGC | |||
6 |
F: GTTCCAGATGTCCCAAGCAT |
||
R: GGTCCGAGTTGCCATAGAAG | |||
HBB |
Gene dosage |
2 |
F: TTGGACCCAGAGGTTCTTTG |
R: GAGCCAGGCCATCACTAAAG | |||
B2M | Gene dosage | 2 | F: CTCACGTCATCCAGCAGAGA |
R: AGTGGGGGTGAATTCAGTGT |
Forward and reverse primers sequences were used to amplify the RS1, HBB, and B2M genes. Forward primers for gene dosage analysis were labeled with 6-FAM. Annealing temperature was 55 °C, with exception of RS1 primers for amplification of exon 2 (60 °C), exon 4 (60 °C), and exon 5 (58 °C).