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. 2009 Mar 23;27(13):2163–2169. doi: 10.1200/JCO.2008.17.4839

Table A1.

Primer Sequences of the Germ-Line Polymorphisms in Genes of Interest

Gene Primer Sequences Restriction Enzymes Polymorphisms
GSTM1 M+/M− (deletion)
    Forward 5′-GAACTCCCTGAAAAGCTAAAGC-3′
    Reverse 5′-GTTGGGCTCAAATATACGGTGG-3′
GSTT1 T+/T− (deletion)
    Forward 5′-TTCCTTACTGGTCCTCACATCTC-3′
    Reverse 5′-TCACCGGATCATGGCCAGCA-3′
GSTP1-105 BsmAI Ile/Val (exon 5)
    Forward 5′-ACCCCAGGGCTCTATGGGAA-3′
    Reverse 5′-TGAGGGCACAAGAAGCCCCT-3′
ERCC1-118 BsrDI C/T (exon 118)
    Forward 5′-GCAGAGCTCACCTGAGGAAC-3′
    Reverse 5′-GAGGTGCAAGAAGAGGTGGA-3′
ERCC1 3′UTR C/A
    Forward 5′-TGAGCCAATTCAGCCACT-3′
    Reverse 5′-TAGTTCCTCAGTTTCCCG-3′
XRCC3 NcoI Thr241Met (exon 7)
    Forward 5′-GCCTGGTGGTCATCGACTC-3′
    Reverse 5′-ACAGGGCTCTGGAAGGCACTGCTCAGCTCACGCACC-3′
XRCC1 NciI Arg/Gln (exon 10)
    Forward 5′-GCATCGTGCGTAAGGAGTG-3′
    Reverse 5′-CCTTCCCTCATCTGGAGTAC-3′
HER2 BsmAI Ile/Val
    Forward 5′-AGAGCGCCAGCCCTCTGACGTCCAT-3′
    Reverse 5′-TCCGTTTCCTGCAGCAGTCTCCGCA-3′
XPD-156 TfiI C/A (exon 6)
    Forward 5′-GCAGTACCAGCATGACACCA-3′
    Reverse 5′-TTGGCATGCAGGATTGAGTA-3′
XPD-751 MBOII Lys/Gln (exon 23)
    Forward 5′-CCCTCTCCCTTTCCTCTGTT-3′
    Reverse 5′-GGCAAGACTCAGGAGTCACC-3′
p53 (13964GC) MspI G/C (intron 6)
    Forward 5′-CTTGCCACAGGTCTCCCCAA-3′
    Reverse 5′-TGTGCAGGGTGGCAAGTGGC-3′
p53 (codon 72) BstUI Arg/Pro (G/C)
    Forward 5′-ACAAGGGTTGGGCTGGGACCTGGAG-3′
    Reverse 5′-TGAGGGTGTGATGGGATGGATAAAAGC-3′
CDA Lys/Gln
    Forward 5′-TGAAGCCTGAGTGTGTCCAG-3′
    Reverse 5′-GTGCCCACCTTTACCTTTGA-3′

Abbreviation: CDA, cytidine deaminase.