Table 1.
Time Constants of Molecular Dynamics, Protein Motion and Catalysisa
Time | sec | ||||
s | 1 | common kcat range | |||
ms | 10−1 | ||||
10−2 | kcat PNP | ||||
10−3 | flap opening TIM | kchem PNP | |||
μs | 10−4 | rate O2 Hb to deoxy Hb | loop motion PNP | ||
10−5 | flap closing OPRTase and PTPase | domain motion in protein | |||
10−6 | |||||
ns | 10−7 | substrate/ligand binding PNPb | |||
10−8 | rotation/translation for NACs catalytic site capture limita | ||||
10−9 | |||||
ps | 10−10 | H2O diffuses two diameters | |||
10−11 | collisionless H+ ion transfer | ||||
10−12 | light travels 0.3 mm | ||||
fs | 10−13 | bond vibration; TS lifetime | |||
10−14 | TS PNPc | ||||
10−15 |