Table 1.
pattern | peptide | # CG nodes | # CG edges |
P1 | G1 | 13/12 | 22/19 |
P2 | G1 | 16/16 | 43/29 |
P3 | G1 | 35/30 | 210/100 |
P3 | G2 | 25/15 | 100/0 |
P4 | G2 | 10/8 | 14/9 |
Ala-1(a) | Ala(b) | 73/73 | 1918/286 |
(X)19(c) | Ala(b) | 380/346 | 53010/3948 |
Patterns P1–P4 and peptides G1–G2 refer to Figure 1. In all examples, k is equal to the pattern size. In columns 3 and 4, data shown in regular and bold font concern respectively the classical and modified CG building rules.
(a) linear pattern of size 19 corresponding to alamethicin F50 without the last monomer
(b) alamethicin F50 [NORINE:NOR00007]
(c) linear pattern of 19 'X' monomers