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. 2009 May;182(1):325–336. doi: 10.1534/genetics.108.099549

TABLE 6.

Average nucleotide divergence for protein-coding genes between D. pulex and five of its congeners

Ks (SE) Ka (SE) Ka/Ks (SE)
D. arenata 0.00998 0.00345 0.00002 0.00002 0.0010 0.0016
D. pulicaria 0.00342 0.00380 0.00003 0.00002 −0.0120 0.0080
D. obtusa 0.06338 0.02085 0.00141 0.00138 0.0163 0.0222
D. ambigua 0.12205 0.00825 0.00570 0.00570 0.0501 0.0476
D. magna 0.39928 0.05362 0.01093 0.01093 0.0316 0.0285
D. mendotae 0.21803 0.03903 0.00295 0.00295 0.0115 0.0131

Ka, number of nonsynonymous substitutions per nonsynonymous site; Ks, number of synonymous substitutions per synonymous site. For both Ka and Ks, mean within-species diversity (averaged between the two species being compared) was subtracted from raw estimates of divergence to get the net divergence between species.