TABLE 3.
BLAST similarity and abundance data for Cyanobacteria libraries
| Top subsection (genus or variant)a | Representative (GenBank accession no.) | GenBank descriptorb (accession no.) | Sourcec | Scores (%)d | % of samples retrieved
|
|||||
|---|---|---|---|---|---|---|---|---|---|---|
| 1 mo | 3 mo | 6 mo | 8 mo | 13 mo (Ge) | Water | |||||
| Chroococcales (Synechococcus- or Thermosynechococcus-like) | ||||||||||
| JrodB13 (FJ206445) | Synechococcus strain JA-3-3Ab (CP000239) | Octopus HS* | 96, 100 | 60 | 30.5 | 15 | 4 | |||
| JrodB20 (FJ206451) | UC cyanobacterium (AF505962) | Heart HS* | 98, 99 | 36 | 30.5 | 5 | ||||
| SrodB24A (FJ206384) | Synechococcus strain TS-15 (AY884054) | Octopus HS* | 99, 99 | 4 | 4.5 | 4 | ||||
| FwatB59 (FJ206272) | Synechococcus strain C9 (AF132773) | Octopus HS* | 98, 100 | 5 | 8.5 | 31 | 25 | |||
| DrodB46 (FJ206786) | Thermosynechococcus elongatus (BA000039) | Japan HS | 92, 100 | 5 | ||||||
| Chroococcales (OS type I- and P-like)f | ||||||||||
| SrodB47A (FJ206399) | UC cyanobacterium OS-P (L35331) | Octopus HS* | 98, 99 | 11 | 15 | 4 | 50 | |||
| SrodB41A (FJ206395) | Cyanobacterium OS-I (L04709) | Octopus HS* | 98, 98 | 6 | 25 | |||||
| SrodB27 (FJ206361) | UC cyanobacterium (EF429514) | Philippines HS | 98, 97 | 13 | 30 | 52 | 15 | |||
| SrodB35A (FJ206391) | UC cyanobacterium (EF126240) | Indonesia mat | 96, 99 | 4.5 | 5 | 4 | ||||
| Oscillatoriales (Leptolyngbya-like) | ||||||||||
| JulGB7 (FJ206608) | Leptolyngbya strain Greenland_10 (DQ431005) | Greenland HS | 95, 98 | 7 | ||||||
| DrodB12 (FJ206763) | Leptolyngbya badia (EF429297) | alpine seeps | 94, 96 | 5 | ||||||
| JulGB8 (FJ206609) | Leptolyngbya strain NB2a-c2 (EU528665) | not stated | 93, 89 | 4 | ||||||
| Nostocales (Anabaena- or Calothrix-like) | ||||||||||
| DrodB12A (FJ206803) | UC bacterium (EF467518) | cave biofilm | 95, 94 | 5 | ||||||
| DrodB50 (FJ206790) | UC cyanobacterium (AY862011) | Queens HS* | 96, 92 | 10 | ||||||
| Stigonematales (Fischerella-like) | ||||||||||
| FrodB34 (FJ206706) | Fischerella strain MV9 (DQ786169) | Costa Rica HS | 99, 99 | 11 | 4 | |||||
| FrodB21 (FJ206699) | UC bacterium (AF407696) | Australia HS | 98, 97 | 20 | 23 | |||||
| FrodB68 (FJ206726) | UC cyanobacterium (DQ471445) | Jordan HS | 94, 98 | 8.5 | ||||||
a
Based on similarity data output from BLAST searches.
b
UC, uncultured.
c
HS, hot spring; *, Yellowstone National Park.
d
The first and second scores are BLAST maximum identity percentages and query coverage percentages, respectively.
e
G, green layer.