TABLE 3.
SNP
|
Risk Allele Frequency
|
|||||||
---|---|---|---|---|---|---|---|---|
Chr | Gene | Identification | Location | Risk Allele | Cases | Controls | OR (95% CI) | P Value |
6 | Estrogen receptor 1 (ESR1) | rs1913474 | Intron 3 | A | 0.13 | 0.26 | 0.33 (0.13–0.85) | 0.022 |
rs1801132 | P324P | C | 0.13 | 0.27 | 0.39 (0.12–0.76) | 0.011 | ||
rs3020317 | Intron 4 | G | 0.13 | 0.26 | 0.18 (0.06–0.55) | 0.003 | ||
rs985694 | Intron 4 | A | 0.11 | 0.23 | 0.19 (0.05–0.67) | 0.010 | ||
rs932477 | Intron 4 | A | 0.07 | 0.16 | 0.25 (0.08–0.87) | 0.030 | ||
rs7757956 | Intron 4 | A | 0.24 | 0.15 | 2.70 (1.19–5.88) | 0.017 | ||
rs3020368 | Intron 5 | A | 0.19 | 0.12 | 2.56 (1.09–5.88) | 0.031 | ||
15 | Aromatase (CYP19A1) | rs7175922 | 5′ | A | 0.26 | 0.13 | 2.17 (1.00–4.55) | 0.050 |
rs1902584 | Intron 1 | A | 0.15 | 0.04 | 3.85 (1.33–11.1) | 0.014 | ||
4 | Phosphodiesterase 5 (PDE5A) | rs11731756 | Intron 7 | C | 0.39 | 0.24 | 2.11 (1.05–4.22) | 0.036 |
rs10034450 | Intron 11 | G | 0.39 | 0.24 | 2.11 (1.05–4.22) | 0.036 | ||
rs1155576 | Intron 11 | C | 0.40 | 0.25 | 2.11 (1.06–4.20) | 0.033 | ||
rs3775843 | Intron 16 | G | 0.39 | 0.24 | 2.11 (1.05–4.23) | 0.036 | ||
8 | Angiopoietin 1 (ANGPT1) | rs4324901 | Intron 1 | A | 0.26 | 0.38 | 0.48 (0.24–0.97) | 0.041 |
rs4268102 | Intron 6 | C | 0.34 | 0.19 | 2.30 (1.16–4.56) | 0.017 | ||
1 | Calcium binding protein A4 (S100A4) | rs743687 | 3′utr | G | 0.18 | 0.07 | 3.82 (1.53–9.53) | 0.004 |
rs1810765 | 3′utr | G | 0.19 | 0.11 | 2.38 (1.09–5.20) | 0.030 | ||
3 | Retinoic acid receptor, beta (RARB) | rs871963 | Intron 2 | T | 0.63 | 0.46 | 1.92 (1.05–3.54) | 0.035 |
rs1153584 | Intron 3 | A | 0.35 | 0.49 | 0.44 (0.23–0.88) | 0.019 | ||
7 | Caveolin 1 (CAV1) | rs926198 | Intron 2 | G | 0.23 | 0.38 | 0.40 (0.19–0.84) | 0.016 |
15 | Homolog of Drosophila mothers against dpp 3 (Smad3) | rs12324036 | Intron 1 | A | 0.34 | 0.48 | 0.50 (0.26–0.95) | 0.035 |
rs4776881 | Intron 1 | G | 0.34 | 0.48 | 0.49 (0.26–0.95) | 0.035 | ||
21 | Runt-related transcription factor 1 (RUNX1) | rs2294163 | Intron 1 | A | 0.29 | 0.17 | 1.96 (1.00–3.85) | 0.049 |
4 | Recombining binding protein 1 for J-kappa (RBPSUH) | rs2077777 | Intron 2 | G | 0.11 | 0.05 | 3.47 (1.15–10.45) | 0.027 |
2 | Xanthine dehydrogenase (XDH) | rs1896846 | Intron 24 | C | 0.39 | 0.23 | 1.96 (1.06–3.70) | 0.031 |
6 | Superoxide dismutase 2 (SOD2) | rs5746136 | 3′utr | A | 0.37 | 0.23 | 2.00 (1.02–4.00) | 0.043 |
11 | NADPH oxidase 4 (NOX4) | rs3017887 | 5′utr | A | 0.05 | 0.14 | 3.88 (1.05–14.29) | 0.042 |
7 | Plasminogen activator inhibitor 1 (SERPINE1) | rs2227714 | 3′utr | A | 0.06 | 0.02 | 7.14 (1.47–33.33) | 0.014 |
17 | Nitric oxide synthase 2A (NOS2A) | rs1137933 | D384D | A | 0.13 | 0.28 | 0.39 (0.17–0.91) | 0.030 |
Definition of abbreviations: Chr = chromosome; CI = confidence interval; OR=odds ratio; SNP=single-nucleotide polymorphism; utr=untranslated region.