Repressed in the stop1 mutant and up-regulated or stable in the wild type with Al and low-pH treatments; 12 (+1 of the gene repressed in AtALMT1-KO) genes |
At1g08430 |
0.01 ± 0.00 |
0.001 |
0.01 ± 0.00 |
0.000 |
0.01 ± 0.00 |
0.001 |
24.40 ± 13.8 |
0.009 |
7.41 ± 4.07 |
0.021 |
ATALMT1 (Al-activated malate transporter 1) |
At1g30270 |
0.13 ± 0.03 |
0.003 |
0.19 ± 0.02 |
0.001 |
1.02 ± 0.14 |
0.866 |
1.44 ± 0.09 |
0.009 |
1.42 ± 0.25 |
0.073 |
ATCIPK23 (CBL-interacting protein kinase 23) |
At1g51840 |
0.25 ± 0.06 |
0.010 |
0.40 ± 0.06 |
0.008 |
1.03 ± 0.15 |
0.765 |
1.31 ± 0.42 |
0.272 |
1.21 ± 0.30 |
0.305 |
Similar to Leu-rich repeat protein kinase, putative |
At2g18480 |
0.06 ± 0.01 |
0.002 |
0.12 ± 0.09 |
0.031 |
1.08 ± 0.15 |
0.433 |
6.97 ± 1.12 |
0.002 |
1.89 ± 0.08 |
0.001 |
PLT3 (probable polyol transporter 3) |
At2g41380 |
0.04 ± 0.01 |
0.003 |
0.14 ± 0.08 |
0.025 |
1.11 ± 0.16 |
0.327 |
6.98 ± 3.70 |
0.021 |
2.28 ± 0.57 |
0.028 |
Similar to embryo-abundant protein-related |
At5g02480 |
0.19 ± 0.03 |
0.003 |
0.31 ± 0.08 |
0.015 |
1.07 ± 0.15 |
0.491 |
2.02 ± 0.31 |
0.015 |
1.18 ± 0.07 |
0.040 |
Similar to SLT1 (sodium- and lithium-tolerant 1) |
At5g06860 |
0.05 ± 0.00 |
0.000 |
0.13 ± 0.06 |
0.017 |
1.17 ± 0.17 |
0.201 |
1.93 ± 1.46 |
0.232 |
1.00 ± 0.74 |
0.992 |
PGIP1 (polygalacturonase-inhibiting protein 1) |
At5g18170 |
0.08 ± 0.01 |
0.001 |
0.27 ± 0.11 |
0.030 |
1.26 ± 0.18 |
0.109 |
2.91 ± 0.39 |
0.005 |
1.19 ± 0.10 |
0.068 |
GDH1 (glutamate dehydrogenase 1) |
At5g19600 |
0.01 ± 0.00 |
0.002 |
0.29 ± 0.06 |
0.008 |
1.33 ± 0.19 |
0.074 |
1.50 ± 0.45 |
0.138 |
2.08 ± 0.37 |
0.019 |
SULTR3;5 (sulfate transporter 3;5) |
At5g22890 |
0.06 ± 0.01 |
0.001 |
0.16 ± 0.08 |
0.023 |
1.07 ± 0.15 |
0.520 |
1.03 ± 0.20 |
0.809 |
1.15 ± 0.15 |
0.200 |
STOP2 (a STOP1 homolog) |
At5g38200 |
0.02 ± 0.00 |
0.001 |
0.10 ± 0.04 |
0.009 |
1.06 ± 0.15 |
0.552 |
4.16 ± 1.79 |
0.027 |
1.77 ± 0.19 |
0.012 |
Similar to hydrolase |
At5g66650 |
0.24 ± 0.03 |
0.003 |
0.19 ± 0.13 |
0.043 |
1.03 ± 0.15 |
0.766 |
9.13 ± 1.11 |
0.001 |
2.68 ± 1.17 |
0.055 |
Similar to unknown protein |
At1g53480 |
0.02 ± 0.01 |
0.002 |
0.02 ± 0.01 |
0.007 |
0.01 ± 0.00 |
0.003 |
1.02 ± 0.02 |
0.341 |
1.10 ± 0.05 |
0.060 |
Similar to unknown protein |
Repressed in the stop1 mutant and up-regulated or stable in the wild type with Al treatment; 24 genes |
At1g35670 |
0.34 ± 0.02 |
0.001 |
0.76 ± 0.06 |
0.030 |
1.05 ± 0.15 |
0.598 |
1.35 ± 0.07 |
0.011 |
0.53 ± 0.08 |
0.020 |
ATCDPK2 (calcium-dependent protein kinase 2) |
At1g60610 |
0.26 ± 0.05 |
0.006 |
0.54 ± 0.05 |
0.008 |
0.95 ± 0.14 |
0.618 |
1.68 ± 0.23 |
0.023 |
1.16 ± 0.10 |
0.095 |
Similar to protein-binding/zinc ion-binding |
At1g61560 |
0.26 ± 0.03 |
0.003 |
0.61 ± 0.09 |
0.029 |
0.99 ± 0.14 |
0.955 |
3.34 ± 0.75 |
0.011 |
2.65 ± 1.02 |
0.045 |
MLO6 (mildew resistance locus O6) |
At1g72870 |
0.22 ± 0.09 |
0.021 |
0.59 ± 0.15 |
0.064 |
0.92 ± 0.13 |
0.406 |
1.29 ± 0.32 |
0.213 |
0.60 ± 0.05 |
0.008 |
Putative disease resistance protein (TIR-NBS class) |
At1g77760 |
0.18 ± 0.05 |
0.008 |
0.88 ± 0.30 |
0.574 |
1.29 ± 0.19 |
0.088 |
1.66 ± 0.30 |
0.038 |
1.68 ± 0.13 |
0.007 |
NIA1 (nitrate reductase 1) |
At2g01180 |
0.31 ± 0.03 |
0.003 |
0.59 ± 0.09 |
0.028 |
1.03 ± 0.15 |
0.779 |
2.13 ± 0.32 |
0.013 |
1.04 ± 0.09 |
0.525 |
ATPAP1 (phosphatidic acid phosphatase 1) |
At2g16660 |
0.34 ± 0.01 |
0.001 |
0.53 ± 0.06 |
0.009 |
1.23 ± 0.18 |
0.126 |
2.62 ± 0.66 |
0.021 |
1.29 ± 0.43 |
0.310 |
Similar to nodulin family protein |
At2g23150 |
0.31 ± 0.03 |
0.002 |
0.61 ± 0.13 |
0.054 |
1.04 ± 0.16 |
0.661 |
2.80 ± 0.55 |
0.012 |
1.27 ± 0.08 |
0.020 |
NRAMP3 (manganese ion transporter) |
At2g28270 |
0.08 ± 0.03 |
0.006 |
0.41 ± 0.26 |
0.114 |
0.98 ± 0.23 |
0.873 |
2.52 ± 0.92 |
0.046 |
0.74 ± 0.34 |
0.357 |
Similar to DC1 domain-containing protein |
At2g39380 |
0.28 ± 0.05 |
0.005 |
0.83 ± 0.07 |
0.064 |
1.03 ± 0.15 |
0.753 |
1.41 ± 0.21 |
0.054 |
2.63 ± 0.22 |
0.003 |
ATEXO70H2 (exocyst subunit EXO70 family protein H2) |
At2g39510 |
0.27 ± 0.07 |
0.013 |
1.32 ± 1.12 |
0.579 |
1.35 ± 0.20 |
0.072 |
9.60 ± 7.83 |
0.032 |
1.97 ± 1.57 |
0.235 |
Similar to nodulin MtN21 family protein |
At2g43590 |
0.25 ± 0.10 |
0.025 |
1.09 ± 0.50 |
0.754 |
0.84 ± 0.15 |
0.157 |
3.20 ± 0.63 |
0.009 |
2.22 ± 2.00 |
0.214 |
Putative chitinase |
At2g45220 |
0.26 ± 0.04 |
0.005 |
0.69 ± 0.02 |
0.003 |
1.13 ± 0.29 |
0.458 |
1.98 ± 0.26 |
0.012 |
0.43 ± 0.11 |
0.026 |
Similar to pectin esterase family protein |
At3g05400 |
0.19 ± 0.04 |
0.004 |
0.63 ± 0.15 |
0.076 |
1.20 ± 0.17 |
0.158 |
2.98 ± 1.04 |
0.031 |
1.07 ± 0.09 |
0.293 |
SUGTL5 (sugar transporter ERD6-like 12) |
At3g28290 |
0.13 ± 0.03 |
0.004 |
0.46 ± 0.16 |
0.055 |
0.87 ± 0.12 |
0.237 |
1.51 ± 0.13 |
0.014 |
0.93 ± 0.28 |
0.713 |
Similar to AT14A |
At4g13420 |
0.03 ± 0.00 |
0.000 |
2.21 ± 1.35 |
0.135 |
0.84 ± 0.12 |
0.165 |
7.54 ± 4.39 |
0.023 |
6.86 ± 1.12 |
0.002 |
HAK5 (high-affinity K+ transporter 5) |
At4g16563 |
0.09 ± 0.07 |
0.026 |
0.22 ± 0.27 |
0.113 |
1.13 ± 0.28 |
0.449 |
1.22 ± 0.31 |
0.307 |
0.35 ± 0.04 |
0.004 |
Similar to aspartyl protease family protein |
At4g30270 |
0.28 ± 0.06 |
0.010 |
0.84 ± 0.63 |
0.693 |
0.91 ± 0.15 |
0.407 |
12.56 ± 5.39 |
0.009 |
2.05 ± 0.76 |
0.074 |
MERI5B (endoxyloglucan transferase) |
At4g38470 |
0.29 ± 0.05 |
0.007 |
0.80 ± 0.22 |
0.297 |
1.17 ± 0.17 |
0.200 |
1.13 ± 0.20 |
0.343 |
1.15 ± 0.17 |
0.245 |
Similar to protein kinase family protein |
At5g07440 |
0.29 ± 0.05 |
0.005 |
0.54 ± 0.15 |
0.060 |
1.16 ± 0.17 |
0.208 |
2.55 ± 0.16 |
0.001 |
1.23 ± 0.17 |
0.123 |
GDH2 (glutamate dehydrogenase 2) |
At5g11670 |
0.26 ± 0.07 |
0.012 |
0.67 ± 0.06 |
0.017 |
1.02 ± 0.14 |
0.834 |
3.62 ± 0.78 |
0.009 |
1.53 ± 0.15 |
0.018 |
ATNADP-ME2 (malic enzyme 2) |
At5g17860 |
0.31 ± 0.03 |
0.003 |
0.98 ± 0.02 |
0.208 |
0.98 ± 0.17 |
0.837 |
1.28 ± 0.06 |
0.012 |
1.02 ± 0.06 |
0.681 |
CAX7 (calcium exchanger 7) |
At5g47560 |
0.12 ± 0.02 |
0.002 |
0.75 ± 0.15 |
0.129 |
1.09 ± 0.19 |
0.423 |
1.05 ± 0.12 |
0.557 |
1.06 ± 0.12 |
0.457 |
ATTDT (tonoplast malate/fumarate transporter) |
At5g66800 |
0.33 ± 0.03 |
0.003 |
0.58 ± 0.06 |
0.011 |
0.71 ± 0.11 |
0.057 |
1.04 ± 0.05 |
0.248 |
0.91 ± 0.06 |
0.124 |
Similar to unknown protein |
Repressed in the stop1 mutant and up-regulated or stable in the wild type with low-pH treatment; four genes |
At1g62280 |
0.97 ± 0.62 |
0.936 |
0.47 ± 0.01 |
0.001 |
0.84 ± 0.15 |
0.161 |
0.33 ± 0.30 |
0.133 |
1.06 ± 0.51 |
0.858 |
SLAH1 (SLAC1 homolog 1) |
At1g75840 |
0.58 ± 0.04 |
0.005 |
0.47 ± 0.03 |
0.002 |
0.99 ± 0.15 |
0.879 |
0.94 ± 0.14 |
0.570 |
1.03 ± 0.06 |
0.460 |
ATROP4 (rho-like GTP-binding protein 4) |
At3g12750 |
0.60 ± 0.05 |
0.010 |
0.46 ± 0.09 |
0.020 |
1.42 ± 0.21 |
0.053 |
0.55 ± 0.04 |
0.004 |
1.62 ± 0.13 |
0.009 |
ZIP1 (zinc transporter 1) |
At5g24780 |
0.65 ± 0.57 |
0.431 |
0.43 ± 0.01 |
0.000 |
2.21 ± 0.42 |
0.004 |
1.06 ± 1.02 |
0.918 |
4.00 ± 1.69 |
0.027 |
VSP1 (vegetative storage protein1) |