Table II.
Expression of RLK/Pelle genes under abiotic and biotic stress conditions
Response: | Up-Regulation
|
Down-Regulation
|
||||||
---|---|---|---|---|---|---|---|---|
Statistical Test: | RLK/Pellea
|
Tandem/Nontandemb
|
RLK/Pellea
|
Tandem/Nontandemb
|
||||
P | O/Uc | P | O/Uc | P | O/Uc | P | O/Uc | |
Abiotic stress conditions | ||||||||
UV-B | 9.36E-25 | O (28)d | 0.002 | O (37)e | 4.58E-05 | O (17)d | 5.64E-04 | U (6)e |
Wounding | 1.61E-06 | O (10) | 0.237 | (12) | 8.42E-06 | O (5) | 0.062 | (2) |
Drought | 0.033f | U (0.5) | 0.244 | (0) | 0.158 | (0.2) | 0.139 | (0.5) |
Cold (4°C) | 0.718 | (13) | 0.690 | (12) | 2.84E-07 | O (25) | 0.064 | (19) |
Heat | 1.00E-04 | U (10) | 0.699 | (9) | 0.377 | (21) | 0.174 | (17) |
Salt | 0.771 | (8) | 0.141 | (5) | 0.561 | (9) | 0.479 | (10) |
Osmotic | 5.15E-04 | O (19) | 0.601 | (19) | 1.49E-06 | O (24) | 5.76E-04 | U (14) |
Biotic stress conditions | ||||||||
Flg22 | 1.37E-47 | O (18) | 0.010f | O (23) | 0.279 | (5) | 0.008f | U (1) |
GST-NPP1 | 2.51E-28 | O (13) | 0.012f | O (17) | 0.195 | (3) | 0.108 | (1) |
HrcC− | 1.31E-48 | O (19) | 6.62E-05 | O (28) | 0.002 | O (6) | 0.104 | (3) |
P. infestans | 2.52E-17 | O (18) | 0.076 | (22) | 0.008f | O (12) | 0.011f | U (6) |
P. syringae pv phaseolicola | 1.57E-44 | O (25) | 0.012f | O (31) | 0.029f | O (10) | 0.009f | U (4) |
HrpZ | 4.02E-43 | O (23) | 0.013f | O (28) | 0.555 | (7) | 0.008f | U (2) |
AvrRpm1 | 3.18E-04 | O (14) | 0.676 | (12) | 0.024f | O (12) | 0.207 | (9) |
DC3000 | 0.393 | (12) | 0.710 | (12) | 6.61E-07 | O (20) | 0.514 | (17) |
χ2 tests were conducted to determine whether RLK/Pelle genes were overrepresented among genes up- or down-regulated by stress conditions compared with all Arabidopsis genes.
χ2 tests were conducted to determine whether tandem RLK/Pelle genes were over-represented among genes up- or down-regulated by stress conditions compared with nontandem RLK/Pelles.
O and U indicate whether significant differences are due to overrepresentation or underrepresentation, respectively.
Numbers in parentheses indicate the percentage of RLK/Pelle genes that are up- or down-regulated.
Numbers in parentheses indicate the percentage of tandem RLK/Pelle genes that are up- or down-regulated.
Not significant after adjusting for multiple testing with sequential Bonferroni adjustment.