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. 2007 Jul 19;3:295–305.

Table 3.

Cross-validation for common peaks.

Training sample size (%) TP TN FP FN Sensitivity Specificity Accuracy
Binary logistic regression 0.4 80169 10970 3030 7831 0.9110 0.7836 0.8935
0.6 52459 7542 1458 5541 0.9045 0.8380 0.8955
0.8 26258 4256 744 2742 0.9054 0.8512 0.8975
SVM 0.4 81890 9144 4856 6110 0.9306 0.6531 0.8925
0.6 54293 6543 2457 3707 0.9361 0.7270 0.9080
0.8 27333 3769 1231 1667 0.9425 0.7538 0.9148
LDA 0.4 81219 11258 2742 6781 0.9229 0.8041 0.9066
0.6 54271 7380 1620 3729 0.9357 0.8200 0.9202
0.8 27320 4021 979 1680 0.9421 0.8042 0.9218
QDA 0.4 78654 8663 5337 9346 0.8938 0.6188 0.8560
0.6 50593 6991 2009 7407 0.8723 0.7768 0.8595
0.8 25080 4048 952 3920 0.8648 0.8096 0.8567
Neura Networks 0.4 86002 9173 5197 1998 0.9773 0.6383 0.9297
0.6 56730 6180 2820 1270 0.9781 0.6867 0.9390
0.8 28511 3341 1659 489 0.9831 0.6682 0.9368
Classification Trees 0.4 80836 3530 10470 7164 0.9186 0.2521 0.8271
0.6 53349 2623 6377 4651 0.9198 0.2914 0.8354
0.8 26795 1439 3561 2205 0.9240 0.2878 0.8304
Boosting Trees 0.4 79569 2546 9603 1164 0.9856 0.2096 0.8841
0.6 52099 1478 8392 852 0.9839 0.1497 0.8529
0.8 25924 708 9136 440 0.9833 0.0719 0.7355