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. Author manuscript; available in PMC: 2009 Sep 1.
Published in final edited form as: J Chem Inf Model. 2008 Aug 13;48(9):1920–1929. doi: 10.1021/ci800133b

Figure 12.

Figure 12

Top: CHARMMing’s visualization page. Jmol is available and an interface to ChemAxom has also been developed. Bottom: The result of visualizing 1UFY solvated in a rhombic dodecahedronal water structure. The red dots are the water oxygens.