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. 2009 Feb 6;3:18. doi: 10.1186/1752-0509-3-18

Table 1.

Statistics for the 16 clusters for Fig. 1

cl. genes HL phase width ontology
mean std mean std mean std
1 101 13.26 (9.54) 32.4 (9.4) 2.2 (0.56) RNA, rRNA, and tRNA processing and metabolism, ribosome biogenesis and assembly
2 58 16.02 (19.07) 26.3 (7.6) 2.3 (0.66) RNA, rRNA and tRNA processing and metabolism, RNA helicase, ribosome assembly
3 101 16.46 (8.65) 43.3 (15.4) 2.1 (0.65) RNA polymerase, translation initiation, regulation, and termination, nucleotide biosynthesis
4 34 19.44 (10.19) 98.2 (9.7) 6.3 (3.54) transferase activity, DNA replication, cell cycle
5 102 22.99 (10.27) 67.7 (11.8) 3.3 (1.95) glycine metabolism, nitrogen and sulfur metabolism, amino acid biosynthesis
6 102 24.59 (11.67) 177.4 (51.0) 5.2 (3.43) retrotransposons, long term repeats
7 124 24.59 (13.45) 109.6 (15.8) 5.0 (2.88) mitochondrial membrane organization and biogenesis, mitochondrial transport
8 151 24.72 (11.80) 128.3 (9.4) 7.6 (2.96) mitochondrial ribosome, envelope, and membranes
9 232 25.76 (13.78) 44.8 (22.5) 2.6 (1.46) cytoplasmic ribosomes, translation processes
10 154 28.34 (16.36) 169.7 (20.3) 6.0 (3.59) ion/cation transmembrane transport, electron transport, oxidative phosphorylation
11 230 31.99 (19.05) 246.7 (35.5) 5.4 (3.90) endopeptidase activity, protein catabolic process, proteasome, actin filament organization, glycolysis, gluconeogenesis
12 65 32.69 (18.68) 214.8 (14.8) 5.5 (2.28) lipid and alcohol metabolic process, peroxisome
13 223 38.24 (28.35) 245.8 (12.6) 9.2 (3.71) kinase activity, vacuolar transport, membrane organization and biogenesis
14 128 39.10 (29.27) 285.5 (16.1) 10.1 (4.19) arginine biosynthesis, protein folding
15 117 42.83 (28.02) 258.7 (11.5) 10.2 (4.59) hydrolase activity, fatty acid oxidation, cytokinesis
16 29 45.74 (26.30) 307.8 (15.1) 8.7 (2.84) catalytic activity