Table 1.
Parameter | Target | Lower boundary | Upper boundary | |
---|---|---|---|---|
Ra | Ω cm | 100 | 90 | 250 |
Rm | Ω cm2 | 21 000 | 10 000 | 60 000 |
Cm | μF cm−2 | 1.5 | 0.5 | 1.5 |
GIh | pS μm−2 | 12 | 0 | 50 |
Epassive | mV | −65 | −70 | 0 |
GNa,dend | pS μm−2 | 10 | 0 | 100 |
GNa,soma | pS μm−2 | 50 | 0 | 100 |
GKf,soma | pS μm−2 | 65 | 0 | 100 |
GKf,dend | pS μm−2 | 70 | 0 | 100 |
GKs,soma | pS μm−2 | 15 | 0 | 100 |
GKs,dend | pS μm−2 | 90 | 0 | 100 |
Nadist | μm | 1 000 | 0 | 1000 |
Ks, dist | μm | 900 | 0 | 1000 |
Kf, dist | μm | 500 | 0 | 1000 |
GNa,node | pS μm−2 | 31000 | — | — |
Nashift,act | mV | −7 | — | — |
Nashift,inact | mV | −8 | — | — |
GKf,node | pS μm−2 | 7 800 | — | — |
GKs,node | pS μm−2 | 1 500 | — | — |
The values of the target data set and the ranges over which the genetic algorithm searched for each parameter are given. The values describing axonal properties do not have parameter search ranges since they were used only to generate a training data set but were not included in the parameter data set constrained by the genetic algorithm. The passive parameters are the membrane resistance (Rm), axial resistance (Ra), the membrane capacitance (Cm) and the passive reversal potential of Epassive. The parameters describing the voltage-gated Na+ conductance are the somatic conductance density (GNa,soma), the nodal conductance density (GNa,node), the dendritic conductance density (GNa,dend), the distance along the dendrite over which the conductance density changes from its somatic value to the dendritic value (Nadist), the shift in the voltage of half activation (Nashift,act) and the shift in the voltage of half inactivation (Nashift,inact). The parameters describing the Kf conductance are the somatic conductance density (GKf,soma), the nodal conductance density (GKf,node), the dendritic conductance density (GKf,dend) and the distance along the dendrite over which the conductance density changes from its somatic value to the dendritic value (Kf,dist). The parameters describing the Ks conductance are the somatic conductance density (GKs,soma), the nodal conductance density (GKs,node), the dendritic conductance density (GKs,dend) and the distance along the dendrite over which the conductance density changes from its somatic value to the dendritic value (Ks,dist). The Ih conductance was described just by the conductance density (GIh).