Figure 4.
Multiple sequence alignment of selected representatives of the F420-0:γ-l-glutamate ligase family and its homologues from microorganisms known to produce coenzyme F420. Sequence identities are highlighted in red and similarities are shown as red letters. The corresponding secondary structure elements of CofE-AF are shown on the top (black). Magenta stars indicate residues that coordinate metal ions, and green dots indicate residues interacting with a nucleotide (GDP). The Gene Bank accession numbers correspond to the following proteins: gi|2648269 CofE-AF from A. fulgidus DSM 4304, gi | 19887484 uncharacterized conserved protein Methanopyrus kandleri AV19, gi|15791326 hypothetical protein VNG2586C Halobacterium sp. NRC-1, gi|15679037 hypothetical protein MTH1019 M. thermautotrophicus str. Delta H, gi|2833574 F420-0:γ-glutamyl ligase M. jannaschii MJ0768, gi|45358500 F420-0:γ-l-glutamate ligase from M. maripaludis S2. The sequence alignment was performed using the program Multalin62 and the Figure was generated using ESPript.63