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. 2009 Apr 16;10:109. doi: 10.1186/1471-2105-10-109

Table 4.

Top 10 pathway pairs showing significant difference of Z-transformed interaction scores in the DMD data.

Pathway Pair # of OGs IS dZIS

NM DMD
Hs_beta-arrestins in GPCR Desensitization (15)
D4-GDI Signaling Pathway (22)
0 0.95 -0.71 14.7

D4-GDI Signaling Pathway (22)
Role of arrestins in the activation and targeting of MAP kinases (22)
0 0.94 -0.65 13.2

Eicosanoid Metabolism (25)
Lysine_degradation (28)
0 0.94 -0.66 13.2

Regulation of hematopoiesis by cytokines (28)
Monoamine_GPCRs (34)
0 0.92 -0.66 12.6

Aspirin Blocks Signaling Pathway Involved in Platelet Activation (35)
D4-GDI Signaling Pathway (22)
0 0.90 -0.68 12.3

D4-GDI Signaling Pathway (22)
RB Tumor Suppressor/Checkpoint Signaling in response to DNA damage (23)
0 0.79 -0.80 11.5

T Helper Cell Surface Molecules (16)
TGF beta signaling pathway (34)
0 0.88 -0.64 11.4

D4-GDI Signaling Pathway (22)
Trka Receptor Signaling Pathway (22)
0 0.84 -0.68 11.0

Aspirin Blocks Signaling Pathway Involved in Platelet Activation (35)
Msp/Ron Receptor Signaling Pathway (14)
0 0.81 -0.72 10.8

Msp/Ron Receptor Signaling Pathway (14)
Roles of arrestin-dependent Recruitment of Src Kinases in GPCR Signaling (28)
0 0.79 -0.72 10.5

# of OGs: number of overlapping genes in two gene sets, NM: normal muscle, DMD: Duchenne's muscular dystrophy, dZIS: difference of Z-transformed IS, (): number of genes in a gene set, Nonparametric p value < 8.0E-7.