TABLE 2.
SW-FCCS analysis of Cdc42-CRIB, -N-WASP, and -IRSp53 pairs The table summarizes data derived from SW-FCCS experiments shown in Figs. 4 and 5 on Cdc42 interacting with its effectors. The first column gives the concentration of individual proteins. The second column gives the diffusion times of proteins (see supplemental material). The third column gives percentage of complex formed. The fourth column gives estimated KD. SW-FCCS data are averages ± S.D. (n = 7–28). KD data are expressed as averages ± S.E. (n = 7–28). n = 7–28 cell measurements for each set of experiments.
Constructs | Concentration ± S.D. | Diffusion times (τD) ± S.D. | Complex ± S.D. | ∼KD ± S.E. (R2 value) |
---|---|---|---|---|
nm | ms | % | nm | |
Positive control | ||||
mRFP-GFP (tandem fusion) | 32.3 ± 3.7 | NDa | ||
GFP | 269.6 ± 130.0 | 0.8 ± 0.1 | ||
mRFP | 106.6 ± 64.8 | 1.1 ± 0.2 | ||
Negative control | ||||
Cyto-GFP/mRFP | 3.7 ± 3.4 | Failed to fit linear regression | ||
GFP | 121.0 ± 45.4 | 0.6 ± 0.1 | ||
mRFP | 78.5 ± 35.3 | 0.5 ± 0.1 | ||
GFP-CRIB(domain) and mRFP-Cdc42V12 | 51.6 ± 20.0 | 250 ± 25 (0.56) | ||
GFP-CRIB | 365.0 ± 206.0 | 147.3 ± 180.6 | ||
mRFP-Cdc42V12 | 177.0 ± 69.3 | 88.5 ± 51.1 | ||
GFP-CRIB (domain) and mRFP-Cdc42N17 | 5.0 ± 4.8 | Failed to fit linear regression | ||
GFP-CRIB | 191.0 ± 139.0 | 1.3 ± 0.8 | ||
mRFP-Cdc42N17 | 512.0 ± 288.0 | 10.7 ± 0.7 | ||
GFP-Cdc42V12 and mRFP-NWASP | 84.8 ± 16.2 | 27 ± 3 (0.44) | ||
GFP-Cdc42V12 | 81.8 ± 60.6 | 179.0 ± 270.0 | ||
mRFP-NWASP | 252.0 ± 237.0 | 103.9 ± 47.3 | ||
GFP-Cdc42N17 and mRFP-NWASP | 8.6 ± 4.8 | Failed to fit linear regression | ||
GFP-Cdc42N17 | 71.6 ± 84.8 | 71.0 ± 76.2 | ||
mRFP-NWASP | 162.0 ± 249.0 | 11.2 ± 15.9 | ||
GFP-Cdc42V12 and mRFP-IRSp53 | 30.9 ± 19.4 | 391 ± 33 (0.8) | ||
GFP-Cdc42V12 | 76.3 ± 69.8 | 15.0 ± 9.2 | ||
mRFP-IRSp53 | 224.0 ± 161.0 | 8.5 ± 5.8 | ||
GFP-Cdc42N17 and mRFP-IRSp53 | 10.8 ± 8.8 | 2180 ± 494 (0.09) | ||
GFP-Cdc42N17 | 221.0 ± 168.0 | 86.9 ± 154.1 | ||
mRFP-IRSp53 | 145.0 ± 143.0 | 7.6 ± 4.2 |
ND, not determined