Table 1.
Q, N and P residues counted per amino acid 80-mers in 20 different P-body components
| Protein | Q/N 1 | Q | N | P in Q/N-rich | P (in best 80-mer) 1 | % P (in best 80-mer) | P-rich close to Q/N-rich |
|---|---|---|---|---|---|---|---|
| LSM4 | 38 | 5 | 33 | 1 | 2 | 2.5% | |
| POP2 | 37 | 29 | 8 | 6 | 12 | 15.0% | yes |
| CCR4 | 34 | 11 | 23 | 4 | 10 | 12.5% | yes |
| NOT1 | 30 | 26 | 4 | 1 | 12 | 15.0% | yes |
| EDC3 | 29 | 19 | 10 | 1 | 5 | 6.3% | |
| DHH1 | 25 | 25 | 0 | 17 | 19 | 23.8% | yes |
| DCP2 | 24 | 13 | 11 | 8 | 20 | 25.0% | yes |
| PAT1 | 23 | 19 | 4 | 18 | 23 | 28.8% | yes |
| SCD6 | 22 | 8 | 14 | 2 | 15 | 18.8% | (yes) 2 |
| DCP1 | 22 | 4 | 18 | 2 | 4 | 5.0% | |
| EDC1 | 22 | 5 | 17 | 10 | 10 | 12.5% | yes |
| NOT4 | 21 | 11 | 8 | 9 | 10 | 12.5% | yes |
| PAN3 | 20 | 0 | 20 | 6 | 15 | 18.8% | yes |
| NOT3 | 19 | 9 | 10 | 2 | 13 | 16.3% | (yes) 2 |
| NOT5 | 15 | 8 | 7 | 3 | 12 | 15.0% | |
| XRN1 | 15 | 5 | 10 | 1 | 24 | 30.0% | (yes) 2 |
| PAN2 | 15 | 7 | 8 | 2 | 10 | 12.5% | |
| LSM1 | 14 | 8 | 6 | 1 | 2 | 2.5% | |
| NOT2 | 11 | 8 | 3 | 7 | 8 | 10.0% | |
| EDC2 | 8 | 5 | 3 | 6 | 9 | 11.3% |
1
Values indicate the number of residues in the highest scoring 80-mer for that protein.
2
P-rich region near Q/N-rich region scoring <20