Table 2.

Prediction results for the localization of wild type proteins with the Scandinavian protocol.

Compartmenta	tp	fp	tn	fn	Accuracy	Precision	Recall	MCC	Proteins located
Mtm	10	29	1337	140	0.889	0.256	0.067	0.086	39
Mps	0	6	1363	147	0.899	0.000	0.000	-0.021	6
Mma	91	74	1293	58	0.913	0.552	0.611	0.532	165
Gtm	23	178	1240	75	0.833	0.114	0.235	0.079	201
PM	221	35	619	641	0.554	0.863	0.256	0.268	256
S	246	84	1093	93	0.883	0.745	0.726	0.661	330
ER	2	1	1330	183	0.879	0.667	0.011	0.074	3
N	98	23	1097	298	0.788	0.810	0.247	0.368	121
P	6	24	1462	24	0.968	0.200	0.200	0.184	30
C	269	166	852	229	0.739	0.618	0.540	0.392	435
Summary	966b	620b		1888b	0.835c	0.483c	0.289c	0.262c	1586b

Abbreviations for statistical parameters as in Table 1.

^a C, cytosol; Gtm, Golgi, transmembrane; Mma, mitochondrial matrix; Mps, mitochondrial, periplasmic space; Mtm, mitochondrial transmembrane; N, nuclear; P, peroxisomal; PM, plasma membrane; S, secreted

^btotal number

^caverage value.