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. 2009 May 20;4(5):e5628. doi: 10.1371/journal.pone.0005628

Table 1. Primers used for mutant construction, complementation and RT-PCR analyses.

Gene Purpose Primer Name Primer Sequence (5′ - 3′)
omcZ mutant construction 2076-1 ATGTGATGCGATATCCCGGC
2076-2 CGCTGACGTGACACTCGAGAC
2076-3 GTCTCGAGTGTCACGTCAGCGAGTGCCACCTGGGATGAATG
2076-4 GGTGATGCGGAGCTCGTAGATGGCAGGTTGGGCGTCGC
2076-5 CTACGAGCTCCGCATCACC
2076-6 CACCCAGAGGAGGCAGCAGG
GSU1497 mutant construction 1497rg1 CGAACTTTTGAAGCTTACGTTCC
1497rg2R1 GATAGCGGAATTCCATGGTTTCCTCCAGTATG
1497rg3H3 GTATGCAAGCTTTAGTCATATCGGATAACTGATTG
1497rg4C GAAACCCACACCACAGATTCCGTATTGAGCG
rgKANR15′ GCATGAGAATTCCTGACGGAACAGCGGGAAGTCCAGC
rgKANRevH3 GCTATGAAGCTTTCATAGAAGGCGGCGGTGGAATCGAA-
Rg2076R1 GCATATGAATTCAATTCAAGAAAGGAGCAGAAAGGAATG
Rg2076H3 GCATCAAAGCTTTACCGTTTGACTTTCTTCGGAGC
GSU2075 & omcZ operon testing 2076RT-F CCCAGGCAAACGTCATTTCC
2075RT-R CAATGGACGAAAGCACGAAG
pilA q-RT RT_ORF02545_F CCAACACAAGCAGCAAAAAG
RT_ORF02545_R GCAGCGAGAATACCGATGAT
omcB q-RT RT_ORF04536_F GACACGGTCAACCAGAACAA
RT_ORF04536_R GGTCCCAGTTTACGACAGGA
omcE q-RT RT_ORF01030_F CTCGTCCAGCAGCATGAATA
RT_ORF01030_R GGGGTGATCATTGCTCAGAT
omcS q-RT RT_ORF04142_F CAACCTGGCATACGAGTTCA
RT_ORF04142_R CCATAGTAGGCAGCGGTCAT
omcZ q-RT RT_ORF03438_F CACGAGCCTGACACTCACTC
RT_ORF03438_R AAGGTTGCTGACCTTGTTGG
GSU1497 q-RT RT_ORF02546_F ATGGGTGGCAAGGACTTTA
RT_ORF02546_R AACACCCGGTTACCAGAAGA