Table 2. 56 proteins from which most degraded peptides appeared to originate.
A spreadsheet with detailed proteomic parameters for each cyst fluid is provided as Supplemental Data 4 at our Web site1.
| Alpha-1-antitrypsin |
| Alpha-2-HS-glycoprotein |
| Alpha-2-macroglobulin |
| Apolipoprotein A–I |
| Bile salt-activated lipase |
| Carboxypeptidase A1 |
| Carboxypeptidase A2 |
| Carboxypeptidase B |
| Cell adhesion molecule-related/down-regulated by oncogenes |
| Centrosomal protein of 72 kDa |
| Chymotrypsinogen B |
| Cleavage and polyadenylation specificity factor 6 |
| Collagen alpha-3 |
| Collagen alpha-6 |
| Complement C3 |
| Complement factor B |
| C-X-C chemokine receptor type 5 |
| Elastase-2A |
| Elastase-3A |
| Elastase-3B |
| Endothelial lipase |
| Epidermal growth factor receptor kinase substrate 8 |
| Epidermal growth factor receptor kinase substrate 8-like protein 1 |
| Fibrinogen alpha chain |
| Fibrinogen beta chain |
| Fibronectin |
| Gastricsin |
| Gastrokine-1 |
| Gelsolin |
| Haptoglobin |
| Haptoglobin-related protein |
| Hemoglobin subunit alpha |
| Hemoglobin subunit beta |
| Ig alpha-1 chain C |
| Kallikrein-1 |
| Lipase member H |
| Neuronal acetylcholine receptor protein subunit beta-2 |
| Obscurin |
| Osteopontin |
| Pancreatic alpha-amylase |
| Pancreatic lipase-related protein 1 |
| Pancreatic lipase-related protein 2 |
| Pancreatic secretory granule membrane major glycoprotein GP2 |
| Pancreatic triacylglycerol lipase |
| Pepsin A |
| Periostin |
| Polymeric-immunoglobulin receptor |
| Prominin-1 precursor |
| Pro-neuregulin-2, membrane-bound isoform |
| Retinoic acid-induced protein 3 |
| Serum albumin |
| Spectrin alpha chain |
| Thrombospondin-1 |
| Transthyretin |
| Trypsin-1 |
| Trypsin-2 |
| Trypsin-3 |