Table 9.

Modified McDondald-Kreitman test examining variation between ancient polymorphism and pairwise comparisons between species and breeds for the ratio of nonsynonymous (Ka) and synonymous (Ks) polymorphisms

	Ancient	Substitutions							Polymorphisms
		Ba-Mi	Ga-Mi	He-Mi	Bi-Mi	Ho-Mi	Tu-Mi	Ya-Mi	He-Ho	He-Tu	Ho-Tu
Ka	6	17	10	18	16	17	18	19	5	8	3
Ks	27	31	18	29	36	24	29	27	7	10	8
dN/dS	0.065	0.163	0.165	0.185	0.132	0.211	0.185	0.21	0.213	0.239	0.112
χ2	-	2.9	2.4	3.7	1.7	4.6	3.7	4.7	2.6	4.0	0.4
p	-	0.09	0.1	0.05	0.2	0.03	0.05	0.03	0.1	0.04	0.5

Species: (Ba: Banteng, Bi: Bison, Ga: Gaur, He: Hereford, Mi: Mithan, Ho: Holstein, Tu: Tuli,, Ya: Yak)