TABLE 4.
Regulation by known transcription factors of genes differentially expressed upon Cdc53p depletion of the GO term amino acid metabolic process
| Gene group | No. of regulated genes (n = 36)a | Regulation of KTY31 vs KTY3 | Gene name (open reading frame no.) | Regulation typeb |
|---|---|---|---|---|
| 1 | 14 | Up | ARG1 (orf19.7469), ARG3 (orf19.5610), ARO8 (orf19.2098), ARG8 (orf19.3770), ARG5,6 (orf19.4788), ECM42 (orf19.6500), MET15 (orf19.5645), LYS9 (orf19.7448), LYS22 (orf19.4506), orf19.2092, MET6 (orf19.2551), BAT21 (orf19.797), BAT22 (orf19.6994), HIS7 (orf19.5505) | Gcn4p |
| 2 | 4 | Up | MET1 (orf19.5811), MET3 (orf19.5025), CYS3 (orf19.6402), MAE1 (orf19.3419) | Other |
| 3 | 3 | Down | PUT1 (orf19.4274), CAR1 (orf19.3934), CHA1 (orf19.1996) | |
| 4 | 9 | Up | CPA1 (orf19.4630), orf19.5842, orf19.3221, ZCF33 (orf19.5992), ARG4 (orf19.6689), MET14 (orf19.946), orf19.1159, LEU2 (orf19.7080), IDP1 (orf19.5211) | ? |
| 5 | 6 | Down | CBF1 (orf19.2876), MET28 (orf19.7046), CAR2 (orf19.5641), GAD1 (orf19.1153), PUT2 (orf19.3974), ARO10 (orf19.1847) |
a
That is, the number of differentially regulated genes belonging to the listed GO terms.
b
That is, the regulating factor for this group of genes. “Other” includes Hog1p, Rim101p, Ssn6p, Sfu1p, Nrg1p, Mig1p, and Cap1p.