TABLE 1.
Isolates used for sequencing of the Rns ASA.S1 amplicon
| Culture designationa | Culture source | Rns genotype/ DF3 sequenceb | GenBank accession no. |
|---|---|---|---|
| BP:P1:RCS | Right corneal scrape | T4/13 | FJ422513 |
| BP:P2:CB | Corneal button | T4/6 | FJ422515 |
| BP:P2:CS | Corneal scrape | T4/6 | FJ422514 |
| BP:P3:RCS | Right corneal scrape | T4/6 | FJ422517 |
| BP:P3:RCS[2] | Right corneal scrape | T4/6 | FJ422523 |
| BP:P3:LCS | Left corneal scrape | T4/6 | FJ422522 |
| BP:P3:RCL | Right contact lens | T4/6 | FJ422516 |
| BP:P3:RLC | Right lens case | T4/6 | FJ422520 |
| BP:P3:LLC | Left lens case | T4/6 | FJ422521 |
| BP:P4:RCS | Right corneal scrape | T4/6 | FJ422518 |
| BP:P5:LLC | Left lens case | T4/6 | FJ422519 |
| BP:P6:LCS | Left corneal scrape | T4/14 | FJ422524 |
| BP:P7:LCL | Left contact lens | T4/14 | FJ422525 |
| BP:P7:RCL | Right contact lens | T4/15 | FJ422526 |
| BP:P8:LCS | Left corneal scrape | T4/12 | FJ422512 |
| BP:P9:LCS | Left corneal scrape | T4/17 | FJ422537 |
| BP:P9:RCL | Right contact lens | T4/17 | FJ422538 |
| BP:P9:LCL | Left contact lens | T4/17 | FJ422539 |
| BP:P10:RCL | Right contact lens | T4/2 | FJ422528 |
| BP:P10:RCB | Right corneal button | T4/2 | FJ422529 |
| BP:P10:RCS | Right corneal scrape | T4/2 | FJ422530 |
| BP:P11:RCS | Right corneal scrape | T4/2 | FJ422531 |
| BP:P12:LCS | Left corneal scrape | T4/2 | FJ422532 |
| BP:P13:CB | Corneal button | T4/20 | FJ422536 |
| BP:P14:LCS | Left corneal scrape | T4/18 | FJ422533 |
| BP:P14:LC | Lens case | T4/18 | FJ422534 |
| BP:P15:RCS | Right corneal scrape | T4/16 | FJ422527 |
| BP:P16:RCS | Right corneal scrape | T4/21 | FJ422541 |
| BP:P16:LC | Lens case | T4/21 | FJ422540 |
| BP:P16:LC[2] | Lens case | T4/21 | FJ422543 |
| BP:P17:LCS | Left corneal scrape | T4/21 | FJ422542 |
| BP:P18:LCS | Left corneal scrape | T4/21 | FJ422544 |
| BP:P19:RCS | Right corneal scrape | T4/21 | FJ422545 |
| BP:P20:LCS | Left corneal scrape | T4/11 | FJ422511 |
| BP:P21:LCS | Left corneal scrape | T4/11 | FJ422510 |
| BP:P22:LCS | Left corneal scrape | T4/19 | FJ422535 |
| BP:P23:LCS | Left corneal scrape | T5 | FJ422546 |
a
Explanation of culture designations: BP, Bascom Palmer; P, patient; RCS, right corneal scrape; CB, corneal button; LCS, left corneal scrape; LLC, left lens case; RLC, right lens case; LC, lens case; LCL, left contact lens; RCL, right contact lens. [2] indicates second isolates obtained from the same source.
b
The DF3 sequence nomenclature used in this study is the same as that reported by Booton et al. (5). The first part is the Rns genotype and the second part is a unique code assigned to the specific DF3 sequence.