Table 1.
Circadian rhythm gene elements
| Agilent probe | Gene symbol | 8CellA* | 8CellB* | Entrez gene ID** | Fibro- blasts* | iPS* | hES01* | H9ES* | 8Cell/ hES*** | 8Cell/ Fibro | Genbank accession |
|---|---|---|---|---|---|---|---|---|---|---|---|
| A_23_P162037 | ARNTL (BMAL1) | 988.0 | 682.4 | 406 | 432.3 | 635.3 | 421.3 | 301.9 | 2.3 | 1.9 | NM_001178 |
| A_23_P419038 | CLOCK | 7710.0 | 12065.0 | 9575 | 213.5 | 142.1 | 191.1 | 164.1 | 55.7 | 46.3 | NM_004898 |
| A_24_P166168 | CLOCK | 1020.0 | 2668.8 | 9575 | 335.4 | 275.0 | 295.6 | 238.6 | 6.9 | 5.5 | AK096319 |
| A_24_P407235 | CRY1 | 291.0 | 1285.0 | 1407 | 119.0 | 182.1 | 224.8 | 257.6 | 3.3 | 6.6 | NM_004075 |
| A_23_P36665 | CRY1 | 1700.0 | 4520.9 | 1407 | 365.2 | 643.6 | 683.2 | 735.7 | 4.4 | 8.5 | NM_004075 |
| A_23_P388027 | CRY2 | 685.0 | 687.3 | 1408 | 12.4 | 11.6 | 33.2 | 35.6 | 20.0 | 55.2 | NM_021117 |
| A_24_P158587 | CRY2 | 237.0 | 259.3 | 1408 | 55.9 | 49.1 | 115.1 | 111.2 | 2.2 | 4.4 | NM_021117 |
| A_23_P127394 | CRY2 | 1300.0 | 2257.6 | 1408 | 791.9 | 940.2 | 1420.9 | 1976.2 | 1.0 | 2.2 | NM_021117 |
| A_24_P93916 | PER1 | 145.0 | 231.3 | 5187 | 6.2 | 3.2 | 11.0 | 9.5 | 18.4 | 30.3 | NM_021724 |
| A_23_P89589 | PER1 | 949.0 | 5227.0 | 5187 | 344.5 | 609.4 | 971.7 | 1010.7 | 3.1 | 9.0 | BC028207 |
| A_23_P411162 | PER2 | 652.0 | 1652.0 | 8864 | 11.5 | 7.1 | 24.4 | 27.1 | 44.8 | 100.4 | NM_022817 |
| A_23_P209320 | PER2 | 801.0 | 2699.8 | 8864 | 203.7 | 172.0 | 312.0 | 395.2 | 5.0 | 8.6 | NM_022817 |
| A_24_P230948 | PER3 | 84.9 | 890.7 | 8863 | 23.0 | 14.8 | 12.9 | 36.2 | 19.9 | 21.2 | NM_016831 |
| A_23_P201461 | PER3 | 488.0 | 512.6 | 8863 | 58.8 | 27.5 | 47.9 | 65.0 | 8.9 | 8.5 | NM_016831 |