Table 2.
Gene elements elevated on 8-cell arrays
| Gene symbol* | 8CellA** | 8CellB** | Entrez GeneID | Fibro- blasts** | iPS cells** | hES01** | H9ES** | 8Cell/hES | 8Cell/ Fibro |
|---|---|---|---|---|---|---|---|---|---|
| Cell cycle gene elements | |||||||||
| AURKA | 20800.0 | 71812.6 | 6790 | 1521.7 | 3233.7 | 5225.0 | 6338.3 | 8.0 | 37.3 |
| AURKB | 13500.0 | 7485.3 | 9212 | 136.4 | 955.7 | 798.1 | 966.4 | 11.9 | 76.9 |
| AURKC | 24600.0 | 12799.8 | 6795 | 13.5 | 42.9 | 107.5 | 85.6 | 193.7 | 1385.2 |
| CCNA1 | 32400.0 | 28099.2 | 8900 | 3.0 | 149.6 | 85.9 | 74.9 | 376.2 | 10083.2 |
| CCNB1 | 161000.0 | 151796.2 | 891 | 4003.7 | 13791.9 | 19416.6 | 18960.5 | 8.1 | 33.6 |
| CCNB3 | 3100.0 | 2491.0 | 85417 | 26.0 | 16.0 | 26.6 | 19.6 | 121.0 | 107.5 |
| CCNE1 | 115000.0 | 90920.9 | 898 | 1596.4 | 8037.0 | 12575.4 | 13491.6 | 7.9 | 64.5 |
| CCNG2 | 1030.0 | 1397.4 | 901 | 412.2 | 97.2 | 68.0 | 72.9 | 17.2 | 2.9 |
| CDC25B | 28408.3 | 28200.0 | 994 | 4449.0 | 538.3 | 887.1 | 1234.3 | 26.7 | 6.4 |
| CDKN1A | 1510.0 | 4258.5 | 1026 | 27718.3 | 498.5 | 750.9 | 445.0 | 4.8 | 0.1 |
| CDKN1A | 1090.0 | 1066.9 | 1026 | 1232.8 | 79.2 | 44.0 | 31.0 | 28.8 | 0.9 |
| MYC | 27280.9 | 24600.0 | 4609 | 3297.5 | 4033.7 | 5704.0 | 4470.7 | 5.1 | 7.9 |
| MYC | 11401.8 | 1390.0 | 4609 | 82.5 | 81.8 | 401.9 | 384.8 | 16.3 | 77.5 |
| MYC | 1565.3 | 1450.0 | 4609 | 6.8 | 12.8 | 25.6 | 23.3 | 61.7 | 221.7 |
| UHRF1 | 11000.0 | 13033.8 | 29128 | 75.0 | 176.9 | 326.8 | 251.1 | 41.6 | 160.2 |
| UHRF1 | 15700.0 | 62284.0 | 29128 | 1090.2 | 1082.8 | 4078.1 | 3090.0 | 10.9 | 35.8 |
| UHRF2 | 8490.0 | 13844.1 | 115426 | 1941.6 | 823.0 | 1712.7 | 2602.1 | 5.2 | 5.8 |
| UHRF2 | 3890.0 | 4946.6 | 115426 | 714.7 | 277.9 | 344.7 | 464.5 | 10.9 | 6.2 |
| Chromosome duplication gene elements | |||||||||
| GINS3 | 28800.0 | 13693.3 | 64785 | 793.3 | 1851.8 | 5057.2 | 4059.7 | 4.7 | 26.8 |
| GINS3 | 6500.0 | 1213.2 | 64785 | 28.7 | 79.4 | 249.0 | 203.3 | 17.1 | 134.4 |
| GINS4 | 5970.0 | 5842.8 | 84296 | 387.6 | 2093.4 | 215.4 | 228.0 | 26.6 | 15.2 |
| GINS4 | 2890.0 | 3265.3 | 84296 | 73.2 | 493.4 | 65.2 | 103.4 | 36.5 | 42.0 |
| POLS | 16400.0 | 31321.7 | 11044 | 1220.1 | 892.5 | 1047.8 | 1471.3 | 18.9 | 19.6 |
| PTMS | 291000.0 | 83326.5 | 5763 | 5116.9 | 1659.1 | 8936.4 | 20535.0 | 12.7 | 36.6 |
| PTTG1 | 594610.3 | 564000.0 | 9232 | 15479.5 | 31030.4 | 41398.3 | 49470.2 | 12.8 | 37.4 |
| PTTG1IP | 11788.1 | 7140.0 | 754 | 1471.9 | 405.9 | 684.7 | 671.6 | 14.0 | 6.4 |
| PTTG2 | 267263.5 | 302000.0 | 10744 | 3151.4 | 5635.2 | 6024.5 | 6083.0 | 47.0 | 90.3 |
| PTTG3 | 29941.2 | 19300.0 | 26255 | 285.6 | 663.9 | 674.1 | 808.6 | 33.2 | 86.2 |
| STAG3 | 50200.0 | 110926.9 | 10734 | 138.4 | 1080.9 | 1077.4 | 717.1 | 89.8 | 582.1 |
| STAG3L3 | 54500.0 | 24701.3 | 442578 | 493.7 | 908.9 | 690.0 | 522.0 | 65.3 | 80.2 |