Table 4. SNPs detected in peptide sequences based on the SNP data published in PlasmoDB 5.4.
| Peptide | Protein | Sequence | Frequency | Score a |
| P1 | PFA0170c | 3D7: | ||
| VNNLDSTVNYMNSTGNNINNIVNNLDSTVNYMNSTGNNINNIVNNLDSTVNYMNSTGNNINNI | 2.570 | |||
| Hb3: | ||||
| VNNLDSTVNYMNGTGNNINNIVNNLDSTVNYMNSTGNNINNIVNNLDSTVNYMNSTGNNINNI | 1/15 | 2.570 | ||
| P14 | PFC0245c | 3D7: | ||
| GMNNMNGDINNINGDINNMNGDINNMNGDINNMNGDINNMN | 3.100 | |||
| RO-33: | ||||
| GMNNMNEDINNINGDINNMNGDINNMNGDINNMNGDINNMN | 1/10 | 3.450 | ||
| P17 | PFD0110w | 3D7: | ||
| EKKLDILKVNISNINNSLDKLK | manualb | |||
| GHANA1: | ||||
| EKKLDILKANISNINNSLDKLK | 1/11 | manualb | ||
| P23 | 3D7: | |||
| FQKVKEKAEIQKENIEKIKQEINTL | manualb | |||
| 7G8;FCB;K1: | ||||
| FQKVKEKAENQKENIEKIKQEINTL | 4/10 | manualb | ||
| GHANA1: | ||||
| FQKIKEKAENQKENIEKIKQEINTL | 1/10 | manualb | ||
| P33 | PF13_0277 | 3D7: | ||
| YIDDVDRDVENYDKGIANVDHHLNDVH | 3.020 | |||
| 106_1;D6;Dd2;FCC-2;FCR3;GHANA1;Hb3;IT;K1;RO-33 | ||||
| YIDDVNRDVENYDKGIANVDHHLNDVH | 10/12 | 3.080 | ||
| P34 | MAL13P1.336 | 3D7: | ||
| NMNNMNNNMNNMNNNMNNNMNNMNNMN | 3.570 | |||
| D6: | ||||
| NMNNMNNNMNNMNNNMNNNMNNMNSMN | 1/5 | 3.550 | ||
| P36 | PF14_0093 | 3D7: | ||
| SSNNLSDQINILNNNIQHINSTFNNLR | 2.920 | |||
| Senegal3404: | ||||
| SSNNLSDQINILNNNIQHINSIFNNLR | 1/8 | 2.730 | ||
| P45 | PF11_0207 | 3D7: | ||
| EEIKEEIKEVKEEIKEVKEEIKEVKEEIKEVKEEIKE | 4.550 | |||
| GHANA1: | ||||
| EEVKEEIKEVKEEIKEVKEEIKEVKEEIKEVKEEIKE | 1/2 | 4.550 | ||
| P47 | PFA0635c | 3D7: | ||
| NHDTRINDYNKRLTEYNKRLTEYNKRLTEYTKRLNE | 3.520 | |||
| Hb3: | ||||
| NHDTRINDYNKRLTEYNKRLTAYNKRLTEYTKRLNE | 1/9 | 3.320 | ||
| P50 | PFL1605w | 3D7: | ||
| KNDINVQLDDINVQLDDINVQLDDINIQLDEINLN | 3.290 | |||
| 7G8: | ||||
| KNDINVQLDDINVQLDDINIQLDDINIQLDEINLN | 1/10 | 3.270 | ||
| D10: | ||||
| KNDINVQLDDINVQLDDINVQLDDINVQLDEINLN | 1/13 | 3.310 | ||
| P51 | PFD0985w | 3D7: | ||
| DNNVNNMDNNVNNVDNNVNNVDNNLNNVDNNVNN | 3.950 | |||
| Dd2: | ||||
| DNNVNNVDNNVNNVDNNVNNVDNNLNNVDNNVNN | 1/11 | 3.900 | ||
| P54 | MAL6P1.147 | 3D7: | ||
| DSMNNHKDDMNNYNDNINNYVESMNNYDDIMNK | 2.470 | |||
| FCC-2: | ||||
| DNMNNHKDDMNNYNDNINNYVESMNNYDDIMNK | 1/9 | 2.470 | ||
| GHANA1: | ||||
| NSNNNHKDDMNNYNDNINNYVESMNNYDDIMNK | 1/9 | 1.920 | ||
| P64 | MAL6P1.131 | 3D7: | ||
| NNFVNNKMNNMNNMKNNMNNMNNIMNNIMN | 3.100 | |||
| FCC-2: | ||||
| NNFVNNKMNNMNNMKNNMNNMNNIMNNNMN | 1/8 | 2.650 | ||
| P81 | PF07_0086 | 3D7: | ||
| NEMNKEVNKMNEEVNKMNEEVNKMNEEVNKMNKEVNKMDEEVNKMN | 4.580 | |||
| D10;D6;GHANA1;Santa Lucia: | ||||
| NEMNKEVNKMNEEVNKMNEEVNKMNEEVNKMNEEVNKMDEEVNKMN | 4/9 | 4.580 | ||
| GHANA1: | ||||
| NEMNKEVNKMNEEVNKMNEEVNKMNKEVNKMDKEVNKMDEEVNKMN | 1/7 | 4.580 | ||
| P83 | PFC0345w | 3D7: | ||
| QNKMENDMNIIKNDMNIMENDMNIMENDMNIIKNDMNIME | 3.250 | |||
| KDMNIIKNDMNIIKNNMNIIKNEMNIIKNV | ||||
| D10;FCC-2;V1_S: | ||||
| QNKMENDMNIIKNDMNIKENDMNIMENDMNIIKNDMNIME | 4/9 | 3.220 | ||
| KDMNIIKNDMNIIKNNMNIIKNEMNIIKNV | ||||
| RO-33: | ||||
| QNKMENDMNIIKNDMNIKENDMNIMENDMNIIKNDMNIIE | 1/10 | 3.200 | ||
| KDMNIIKNDMNIIKNNMNIIKNDMNIIKNV | ||||
| P86 | PFL1930w | 3D7: | ||
| NFIKELELQIKNLNNEINTLNDMLKDSEEEIRMLNHTLEEK | 3.710 | |||
| 7G8: | ||||
| NFIKELELQIKNLNNEIKTLNDMLKDSEEEIRMLNHTLEEK | 1/11 | 3.760 | ||
| P94 | PFD0970c | 3D7: | ||
| ENINNMDEKINNVDEQNNNMDEKINNVDEKK | 3.460 | |||
| FCC-2: | ||||
| ENINNMDEKINNVDEQNNNMDEKINNVDEKI | 1/6 | 3.460 | ||
| D10;K1: | ||||
| ENINNMDEKKNKVDEQNNNMDEKINNVDEKK | 4/7 | 2.990 | ||
| D6;FCC-2: | ||||
| ENINNMDEKINKVDEQNNNMDEKINNVDEKK | 3/5 | 2.970 | ||
| RO-33: | ||||
| ENINNMDEKINKVDEQNNNIDEKINNVDEKK | 3/6 | 3.480 | ||
| P97 | PFL0650c | 3D7: | ||
| DTANNVSEMQKIIHTFSLDIKDFKILFEALTKSIQLLNDN | 3.390 | |||
| IENINKEIELLKKKIST | ||||
| FCC-2: | ||||
| DTANNVSEMQKIIHTFSLDIKDFKILFEALTKSIQLLNDN | 1/8 | 3.140 | ||
| IENINKEIELFKKKIST | ||||
| P103 | PFE0840c | 3D7: | ||
| NNMNNININAYNILKDINKYRNIVNNLDH | 2.310 | |||
| Dd2;FCC-2 | ||||
| NNMNNININAYNVLKDINKYRNIVNNLDH | 2/7 | 2.310 | ||
| P116 | PF13_0182 | 3D7: | ||
| RISNILFMLNNIKKEIENVKENILKYIDK | 2.570 | |||
| 106_1;7G8;GHANA1;IT;Senegal3404;V1_S | ||||
| RISNILFMLNNIKKEIENVKENILKYIDR | 6/11 | 2.570 | ||
| P119 | PF11_0240 | 3D7: | ||
| DNVEELNKDIENLNNEIHEIEKMWLFIKK | 3.010 | |||
| GHANA1: | ||||
| DNVEELNKDIEILNNEIHEIEKMWLFIKK | 1/8 | 2.770 | ||
| P122 | PFI1475w | 3D7: | ||
| YDLSIYNKQLEEAHNLISVLEKRIDTLKK | 2.930 | |||
| D10;Dd2;FCC-2 | ||||
| YNLSIYNKQLEEAHNLISVLEKRIDTLKK | 3/16 | 2.640 | ||
| 7G8;D10;Dd2;FCC-2;K1;RO-33;V1_S | ||||
| YDLFIYNKQLEEAHNLISVLEKRIDTLKK | 7/16 | 2.640 | ||
| P134 | PF14_0535 | 3D7: | ||
| KQIDLNINNIDDNKNNIDDHINNIDD | 2.750 | |||
| 7G8: | ||||
| KQIDLNINNIDDHINNIDDHINNIDD | 1/7 | 3.060 | ||
| P144 | PF13_0210 | 3D7: | ||
| HDVNNYQHDVNNYQQDVNNYQHDVNNYQHDVNNYNH | 2.470 | |||
| Dd2;Hb3;RO-33;Senegal3403;V1_S | ||||
| HDVNNYQHDVNNYQQDVNNYQHDVNNYQHDVNNYHH | 4/5 | 2.470 | ||
| P149 | MAL13P1.252 | 3D7: | ||
| NLALNNLRNKLKLLQEDYNDLEKEYLYLKKSLSK | 3.350 | |||
| Dd2: | ||||
| NLALNNLRNKLKLLQEDYNDLEKEYLYLKKGLSK | 1/8 | 3.350 | ||
| P154 | PFL1205c | 3D7: | ||
| QFIILMVKLLSNVYEIVKKINSLNNNYTYLYIN | 2.680 | |||
| 7G8;D10;FCB;FCC2;GHANA1;Hb3;K1;Senegal3404 | ||||
| QFIILMVKLLSNVYEIEKKINSLNNNYTYLYIN | 7/8 | 3.030 | ||
| P156 | PFD1030c | 3D7: | ||
| KINSLKENIENMFDRIDNYIHEVISLKNFVNQ | 2.820 | |||
| K1: | ||||
| KINSLKENIENMFDRIDNYIHVVISLKNFVNQ | 1/8 | 2.460 | ||
| P160 | PF11_0268 | 3D7: | ||
| MNISEFETKITELKEDINKINFMMKDFESKF | 3.170 | |||
| 7G8;D10;D6;Dd2;FCC-2;FCR3;GHANA1;Hb3;IT;K1;RO-33;Senegal3404;V1_S: | ||||
| MNISEFETKITELKEDINKINFMMKAFESKF | 13/13 | 3.020 | ||
| P166 | PFI1180w | 3D7: | ||
| YYNNFDNYNNNFDNYNNNFDNYNNNFDNYN | 2.420 | |||
| GHANA1: | ||||
| YNNNFDNYNNNFDNYNNNFDNYNNNFDNYN | 1/9 | 2.420 |
a
profile score for α-helical coiled coil formation;
b
profile score was manually analyzed.
Positions of SNPs are indicated in bold.