Table 3.
Viral genomes used for the SOM covering a wide range of viruses, shown in Figure 2. 579 viral genomes have at least 10kb of sequence. This is approximately 35% of all fully sequenced viral genomes available at the time of the analysis.
| Name | Accession |
|---|---|
| Bovine adenovirus 2 | AC_000001 |
| Bovine adenovirus 3 | AC_000002 |
| Canine adenovirus type 1 | AC_000003 |
| Duck adenovirus 1 | AC_000004 |
| Human adenovirus type 12 | AC_000005 |
| Human adenovirus type 17 | AC_000006 |
| Human adenovirus type 2 | AC_000007 |
| Human adenovirus type 5 | AC_000008 |
| Porcine adenovirus 5 | AC_000009 |
| Simian adenovirus 21 | AC_000010 |
| Simian adenovirus 25 | AC_000011 |
| Murine adenovirus 1 | AC_000012 |
| Fowl adenovirus 9 | AC_000013 |
| Fowl adenovirus 1 | AC_000014 |
| Human adenovirus type 11 | AC_000015 |
| Turkey adenovirus 3 | AC_000016 |
| Human adenovirus type 1 | AC_000017 |
| Human adenovirus type 7 | AC_000018 |
| Human adenovirus type 35 | AC_000019 |
| Canine adenovirus type 2 | AC_000020 |
| Paramecium bursaria Chlorella virus 1 | NC_000852 |
| Viral hemorrhagic septicemia virus | NC_000855 |
| Enterobacteria phage T4 | NC_000866 |
| Alteromonas phage PM2 | NC_000867 |
| Streptococcus thermophilus bacteriophage Sfi19 | NC_000871 |
| Streptococcus thermophilus bacteriophage Sfi21 | NC_000872 |
| Lactobacillus bacteriophage phi adh | NC_000896 |
| Human herpesvirus 6B | NC_000898 |
| Fowl adenovirus D | NC_000899 |
| Bacteriophage VT2-Sa | NC_000902 |
| Snakehead rhabdovirus | NC_000903 |
| Bacteriophage 933W | NC_000924 |
| Enterobacteria phage Mu | NC_000929 |
| Acyrthosiphon pisum bacteriophage APSE-1 | NC_000935 |
| Murine adenovirus A | NC_000942 |
| Murray Valley encephalitis virus | NC_000943 |
| Myxomavirus | NC_001132 |
| Rabbit fibromavirus | NC_001266 |
| Bacteriophage phi YeO3-12 | NC_001271 |
| Enterobacteria phage 186 | NC_001317 |
| Mycobacterium phage L5 | NC_001335 |
| Sulfolobus spindle-shaped virus 1 | NC_001338 |
| Human herpesvirus 4 | NC_001345 |
| Human herpesvirus 5 (laboratory strain AD169) | NC_001347 |
| Human herpesvirus 3 (strain Dumas) | NC_001348 |
| Saimiriine herpesvirus 2 | NC_001350 |
| Simian foamy virus | NC_001364 |
| Human adenovirus C | NC_001405 |
| Bacteriophage lambda | NC_001416 |
| Enterobacteria phage PRD1 | NC_001421 |
| Bacillus phage PZA | NC_001423 |
| Japanese encephalitis virus | NC_001437 |
| Achole plasmaphage L2 | NC_001447 |
| Venezuelan equine encephalitis virus | NC_001449 |
| Avian infectious bronchitis virus | NC_001451 |
| Human adenovirus F | NC_001454 |
| Human adenovirus A | NC_001460 |
| Bovine viral diarrheavirus 1 | NC_001461 |
| Dengue virus type 2 | NC_001474 |
| Dengue virus type 3 | NC_001475 |
| Dengue virus type 1 | NC_001477 |
| Equid herpesvirus 1 | NC_001491 |
| Cryphonectria hypovirus 1 | NC_001492 |
| Ictalurid herpesvirus 1 | NC_001493 |
| Measles virus | NC_001498 |
| O’nyong-nyong virus | NC_001512 |
| Rabies virus | NC_001542 |
| Ross River virus | NC_001544 |
| Sindbis virus | NC_001547 |
| Sendai virus | NC_001552 |
| Vaccinia virus | NC_001559 |
| Vesicular stomatitis Indiana virus | NC_001560 |
| West Nile virus | NC_001563 |
| Cell fusing agent virus | NC_001564 |
| Beet yellows virus | NC_001598 |
| Enterobacteria phage T7 | NC_001604 |
| Lake Victoria marburg virus | NC_001608 |
| Bacteriophage P4 | NC_001609 |
| Variola virus | NC_001611 |
| Sonchus yellow net virus | NC_001615 |
| Autographa californica nucleopolyhedrovirus | NC_001623 |
| Rice tungro spherical virus | NC_001632 |
| Equid herpesvirus 2 | NC_001650 |
| Infectious hematopoietic necrosis virus | NC_001652 |
| African swine fever virus | NC_001659 |
| Citrus tristeza virus | NC_001661 |
| Human herpesvirus 6 | NC_001664 |
| Tick-borne encephalitis virus | NC_001672 |
| Haemophilus phage HP1 | NC_001697 |
| Lactococcus phage c2 | NC_001706 |
| Human herpesvirus 7 | NC_001716 |
| Fowl adenovirus A | NC_001720 |
| Human immunodeficiency virus 2 | NC_001722 |
| Snakehead retrovirus | NC_001724 |
| Molluscum contagiosum virus | NC_001731 |
| Canine adenovirus | NC_001734 |
| Human foamy virus | NC_001736 |
| Human respiratory syncytial virus | NC_001781 |
| Papaya ringspot virus | NC_001785 |
| Barmah Forest virus | NC_001786 |
| Human spuma retrovirus | NC_001795 |
| Human parainfluenza virus 3 | NC_001796 |
| Human herpesvirus 2 | NC_001798 |
| Respiratory syncytial virus | NC_001803 |
| Human herpesvirus 1 | NC_001806 |
| Louping ill virus | NC_001809 |
| Duck adenovirus A | NC_001813 |
| Lymphocystis disease virus 1 | NC_001824 |
| Streptococcus phage Cp-1 | NC_001825 |
| Murid herpesvirus 4 | NC_001826 |
| Bovine foamy virus | NC_001831 |
| Bacteriophage sk1 | NC_001835 |
| Little cherry virus 1 | NC_001836 |
| Sweet potato feathery mottle virus | NC_001841 |
| Equid herpesvirus 4 | NC_001844 |
| Murine hepatitis virus strain A59 | NC_001846 |
| Bovine herpesvirus 1 | NC_001847 |
| Walleye dermal sarcoma virus | NC_001867 |
| Simian-Human immunodeficiency virus | NC_001870 |
| Feline foamy virus | NC_001871 |
| Rhopalosiphum padi virus | NC_001874 |
| Orgyia pseudotsugata nucleopolyhedrovirus | NC_001875 |
| Bovine adenovirus B | NC_001876 |
| Bacteriophage SPBc2 | NC_001884 |
| Enterobacteria phage P2 | NC_001895 |
| Mycobacteriophage D29 | NC_001900 |
| Bacteriophage N15 | NC_001901 |
| Methanobacterium phage psiM2 | NC_001902 |
| Hendra virus | NC_001906 |
| Bacteriophage bIL170 | NC_001909 |
| Canine distemper virus | NC_001921 |
| Igbo Ora virus | NC_001924 |
| Mycoplasma arthritidis bacteriophage MAV1 | NC_001942 |
| Hemorrhagic enteritis virus | NC_001958 |
| Porcine reproductive and respiratory syndrome virus | NC_001961 |
| Bombyx mori nucleopolyhedrovirus | NC_001962 |
| Lymantria dispar nucleopolyhedrovirus | NC_001973 |
| Bacteriophage phi-C31 | NC_001978 |
| Ateline herpesvirus 3 | NC_001987 |
| Bovine respiratory syncytial virus | NC_001989 |
| Melanoplus sanguinipes entomopox virus | NC_001993 |
| Yellow fever virus | NC_002031 |
| Bovine viral diarrhea virus genotype 2 | NC_002032 |
| Human adenovirus D | NC_002067 |
| Streptococcus thermophilus bacteriophage DT1 | NC_002072 |
| Bovine parainfluenza virus3 | NC_002161 |
| Enterobacteria phage HK022 | NC_002166 |
| Bacteriophage HK97 | NC_002167 |
| Spodoptera exigua nucleopolyhedrovirus | NC_002169 |
| Streptococcus thermophilus bacteriophage 7201 | NC_002185 |
| Fowlpox virus | NC_002188 |
| Tupaia paramyxovirus | NC_002199 |
| Mumps virus | NC_002200 |
| Equine foamy virus | NC_002201 |
| Streptococcus thermophilus bacteriophage Sfi11 | NC_002214 |
| Gallid herpesvirus 2 | NC_002229 |
| Northern cereal mosaic virus | NC_002251 |
| Transmissible gastroenteritis virus | NC_002306 |
| Staphylococcus aureus bacteriophage PVL | NC_002321 |
| Xestiac-nigrum granulovirus | NC_002331 |
| Enterobacteria phage P22 | NC_002371 |
| Pseudomonas phage D3 | NC_002484 |
| Staphylococcus aureus prophage phiPV83 | NC_002486 |
| Frog adenovirus | NC_002501 |
| Murid herpesvirus 2 | NC_002512 |
| Ovine adenovirus A | NC_002513 |
| Mycoplasma virus P1 | NC_002515 |
| Roseophage SIO1 | NC_002519 |
| Amsacta moorei entomopox virus | NC_002520 |
| Bovine ephemeral fever virus | NC_002526 |
| Alcelaphine herpesvirus 1 | NC_002531 |
| Equine arteritis virus | NC_002532 |
| Lactate dehydrogenase-elevating virus | NC_002534 |
| Zaire ebola virus | NC_002549 |
| Gallid herpesvirus 3 | NC_002577 |
| Plutella xylostella granulovirus | NC_002593 |
| Newcastle disease virus | NC_002617 |
| Methanothermobacter wolfeii prophage psiM100 | NC_002628 |
| Dengue virus type 4 | NC_002640 |
| Meleagrid herpesvirus 1 | NC_002641 |
| Yaba-like disease virus | NC_002642 |
| Human coronavirus 229E | NC_002645 |
| Bacillus phage GA-1 | NC_002649 |
| Heliocoverpa armigera nucleopolyhedrovirus G4 | NC_002654 |
| Mycobacteriophage Bxb1 | NC_002656 |
| Classical swine fever virus | NC_002657 |
| Staphylococcus aureus temperate phage phi SLT | NC_002661 |
| Bovine herpesvirus 4 | NC_002665 |
| Bacteriophage bIL285 | NC_002666 |
| Bacteriophage bIL286 | NC_002667 |
| Bacteriophage bIL309 | NC_002668 |
| Bacteriophage bIL310 | NC_002669 |
| Bacteriophage bIL311 | NC_002670 |
| Bacteriophage bIL312 | NC_002671 |
| Bovine adenovirus D | NC_002685 |
| Cercopithecine herpesvirus 7 | NC_002686 |
| Ectocarpus siliculosus virus | NC_002687 |
| Porcine adenovirus C | NC_002702 |
| Bacteriophage Tuc2009 | NC_002703 |
| Nipah virus | NC_002728 |
| Bacteriophage HK620 | NC_002730 |
| Lactococcus lactis bacteriophage TP901-1 | NC_002747 |
| Tupaia herpesvirus | NC_002794 |
| Lactococcus phage BK5-T | NC_002796 |
| Spring viremia of carp virus | NC_002803 |
| Cydia pomonella granulovirus | NC_002816 |
| Taura syndrome virus | NC_003005 |
| Lumpy skin disease virus | NC_003027 |
| Invertebrate iridescent virus 6 | NC_003038 |
| Avian paramyxovirus 6 | NC_003043 |
| Bovine coronavirus | NC_003045 |
| Streptococcus pneumoniae bacteriophage MM1 | NC_003050 |
| Epiphyas postvittana nucleopolyhedrovirus | NC_003083 |
| Culex nigripalpus baculovirus | NC_003084 |
| Bacteriophage Mx8 | NC_003085 |
| Simian hemorrhagic fever virus | NC_003092 |
| Helicoverpa armigera nuclearpolyhedrosis virus | NC_003094 |
| Spodopteralitura nucleopolyhedrovirus | NC_003102 |
| Temperate phage PhiNIH1.1 | NC_003157 |
| Sulfolobus islandicus filamentous virus | NC_003214 |
| Semliki forest virus | NC_003215 |
| Bacteriophage A118 | NC_003216 |
| Shrimp white spot syndrome virus | NC_003225 |
| Australian bat lyssa virus | NC_003243 |
| Human adenovirus E | NC_003266 |
| Bacteriophage phiCTX | NC_003278 |
| Bacteriophage phiETA | NC_003288 |
| Bacteriophage PSA | NC_003291 |
| Bacteriophage T3 | NC_003298 |
| Bacteriophage phiE125 | NC_003309 |
| Monkeypox virus | NC_003310 |
| Bacteriophage K139 | NC_003313 |
| Haemophilus phage HP2 | NC_003315 |
| Sinorhizobium meliloti phage PBC5 | NC_003324 |
| Halovirus HF2 | NC_003345 |
| Helicoverpa zea nucleopolyhedrovirus | NC_003349 |
| Bacteriophage P27 | NC_003356 |
| Mycobacteriophage TM4 | NC_003387 |
| Swinepox virus | NC_003389 |
| Cyanophage P60 | NC_003390 |
| Camelpox virus | NC_003391 |
| Cercopithecine herpesvirus 17 | NC_003401 |
| Human herpesvirus 8 | NC_003409 |
| Mayaro virus | NC_003417 |
| Sleeping disease virus | NC_003433 |
| Porcine epidemic diarrhea virus | NC_003436 |
| Human parainfluenza virus 2 | NC_003443 |
| Shigella flexneri bacteriophage V | NC_003444 |
| Human parainfluenza virus 1 strain Washington/1964 | NC_003461 |
| Infectious spleen and kidney necrosis virus | NC_003494 |
| Chimpanzee cytomegalovirus | NC_003521 |
| Bacteriophage phi3626 | NC_003524 |
| Stx2 converting bacteriophage I | NC_003525 |
| Mamestra configurata NPV-A | NC_003529 |
| Cryphonectria hypovirus | NC_003534 |
| Dasheen mosaic virus | NC_003537 |
| Lettuce mosaic virus | NC_003605 |
| Maize chlorotic dwarf virus | NC_003626 |
| Modoc virus | NC_003635 |
| Cowpox virus | NC_003663 |
| Rio Bravo virus | NC_003675 |
| Apoi virus | NC_003676 |
| Pestivirus Reindeer-1 | NC_003677 |
| Pestivirus Giraffe-1 | NC_003678 |
| Border disease virus 1 | NC_003679 |
| Powassan virus | NC_003687 |
| Langat virus | NC_003690 |
| Rice yellow stunt virus | NC_003746 |
| Acyrthosiphon pisum virus | NC_003780 |
| Sweet potato mild mottle virus | NC_003797 |
| Eastern equine encephalitis virus | NC_003899 |
| Aura virus | NC_003900 |
| Vibriophage VpV262 | NC_003907 |
| Western equine encephalomyelitis virus | NC_003908 |
| Salmon pancreas disease virus | NC_003930 |
| Tamana bat virus | NC_003996 |
| Human adenovirus B | NC_004001 |
| Sheeppox virus | NC_004002 |
| Goatpox virus | NC_004003 |
| Leek yellow stripe virus | NC_004011 |
| Ovine adenovirus 7 | NC_004037 |
| Phthorimaea operculella granulovirus | NC_004062 |
| Murid herpesvirus 1 | NC_004065 |
| Lactococcus lactisbacteriophageul36 | NC_004066 |
| Tiomanvirus | NC_004074 |
| VirusPhiCh1 | NC_004084 |
| Sulfolobus islandicus rod-shaped virus 2 | NC_004086 |
| Sulfolobus islandicus rod-shaped virus 1 | NC_004087 |
| Ectromelia virus | NC_004105 |
| Lactobacillus casei bacteriophage A2 | NC_004112 |
| Mamestra configurata nucleopolyhedrovirus B | NC_004117 |
| Montana myotis leukoencephalitis virus | NC_004119 |
| Human metapneumovirus | NC_004148 |
| Heliothis zea virus 1 | NC_004156 |
| Dugbe virus segment L | NC_004159 |
| Reston Ebola virus | NC_004161 |
| Chikungunya virus | NC_004162 |
| Bacteriophage B103 | NC_004165 |
| Bacteriophage SPP1 | NC_004166 |
| Bacteriophage phi-105 | NC_004167 |
| Bacteriophage r1t | NC_004302 |
| Streptococcus thermophilus bacteriophage O1205 | NC_004303 |
| Bacteriophage phig1e | NC_004305 |
| Salmonella typhimurium phage ST64B | NC_004313 |
| Rachiplusia ou multiple nucleopolyhedrovirus | NC_004323 |
| Burkholderia cepacia phage Bcep781 | NC_004333 |
| Salmonella typhimurium bacteriophage ST64T | NC_004348 |
| Alkhurma virus | NC_004355 |
| Callitrichine herpesvirus 3 | NC_004367 |
| Treeshrew adenovirus | NC_004453 |
| Vibrio harveyi bacteriophage VHML | NC_004456 |
| Bacteriophage IN93 | NC_004462 |
| Pseudomonas aeruginosa phage PaP3 | NC_004466 |
| Streptococcus pyogenes phage 315.1 | NC_004584 |
| Streptococcus pyogenes phage 315.2 | NC_004585 |
| Streptococcus pyogenes phage 315.3 | NC_004586 |
| Streptococcus pyogenes phage 315.4 | NC_004587 |
| Streptococcus pyogenes phage 315.5 | NC_004588 |
| Streptococcus pyogenes phage 315.6 | NC_004589 |
| Staphylococcus aureus phage phi11 | NC_004615 |
| Staphylococcus aureus phage phi12 | NC_004616 |
| Staphylococcus aureus phage phi13 | NC_004617 |
| Pseudomonas phage phiKZ | NC_004629 |
| Bacteriophage phi-BT1 | NC_004664 |
| Pseudomonas phage gh-1 | NC_004665 |
| Grapevine leaf roll-associated virus 3 | NC_004667 |
| Staphylococcus phage 44AHJD | NC_004678 |
| Staphylococcus aureus phage phiP68 | NC_004679 |
| Mycobacteriophage Che8 | NC_004680 |
| Mycobacteriophage CJW1 | NC_004681 |
| Mycobacteriophage Bxz2 | NC_004682 |
| Mycobacteriophage Che9c | NC_004683 |
| Mycobacteriophage Rosebush | NC_004684 |
| Mycobacteriophage Corndog | NC_004685 |
| Mycobacteriophage Che9d | NC_004686 |
| Mycobacteriophage Bxz1 | NC_004687 |
| Mycobacteriophage Omega | NC_004688 |
| Mycobacteriophage Barnyard | NC_004689 |
| Adoxophyes honmai nucleopolyhedrovirus | NC_004690 |
| SARS coronavirus | NC_004718 |
| Grapevine rootstock stem lesion associated virus | NC_004724 |
| Bacteriophage RM378 | NC_004735 |
| Staphylococcus phage phiN315 | NC_004740 |
| Bacteriophage L-413C | NC_004745 |
| Lactococcus phage P335 | NC_004746 |
| Enterobacteria phage epsilon15 | NC_004775 |
| Yersinia pestis phage phiA1122 | NC_004777 |
| Choristoneura fumiferana MNPV | NC_004778 |
| Cercopithecine herpesvirus 1 | NC_004812 |
| Phage phi4795 | NC_004813 |
| Streptococcus phage C1 | NC_004814 |
| Bacteriophage phBC6A51 | NC_004820 |
| Bacteriophage phBC6A52 | NC_004821 |
| Bacteriophage Aaphi23 | NC_004827 |
| Deformed wing virus | NC_004830 |
| Enterobacteria phage SP6 | NC_004831 |
| Xanthomonas oryzae bacteriophage Xp10 | NC_004902 |
| Stx1 converting bacteriophage | NC_004913 |
| Stx2 converting bacteriophage II | NC_004914 |
| Halovirus HF1 | NC_004927 |
| Enterobacteria phage RB69 | NC_004928 |
| Streptococcus mitis phage SM1 | NC_004996 |
| Papaya leaf-distortion mosaic potyvirus | NC_005028 |
| Onion yellow dwarf virus | NC_005029 |
| Goose paramyxovirus SF02 | NC_005036 |
| Adoxophyes orana granulovirus | NC_005038 |
| Yokose virus | NC_005039 |
| Bacteriophage phiKMV | NC_005045 |
| Bacteriophage WPhi | NC_005056 |
| Omsk hemorrhagic fever virus | NC_005062 |
| Kamiti River virus | NC_005064 |
| Little cherry virus 2 | NC_005065 |
| Enterobacteria phage RB49 | NC_005066 |
| Cryptophlebia leucotreta granulovirus | NC_005068 |
| Bacteriophage PY54 | NC_005069 |
| Bacteriophage KVP40 | NC_005083 |
| Fer-de-lance virus | NC_005084 |
| Burkholderia cepacia phage BcepNazgul | NC_005091 |
| Hirame rhabdovirus | NC_005093 |
| Bacteriophage 44RR2.8t | NC_005135 |
| Choristoneura fumiferana nucleopolyhedrovirus | NC_005137 |
| Human coronavirus OC43 | NC_005147 |
| Bacteriophage D3112 | NC_005178 |
| Yaba monkey tumor virus | NC_005179 |
| Bacillus thuringiensis bacteriophage Bam35c | NC_005258 |
| Mycobacteriophage PG1 | NC_005259 |
| Bacteriophage Aeh1 | NC_005260 |
| Bovine herpesvirus 5 | NC_005261 |
| Burkholderia cepacia phage Bcep22 | NC_005262 |
| Burkholderia cenocepacia phage Bcep1 | NC_005263 |
| Psittacid herpesvirus 1 | NC_005264 |
| Sulfolobus spindle-shaped virus 2 | NC_005265 |
| Bacteriophage Felix01 | NC_005282 |
| Dolphin morbillivirus | NC_005283 |
| Bacteriophage phi1026b | NC_005284 |
| Bacteriophage EJ-1 | NC_005294 |
| Crimean-Congo hemorrhagic fever virus segment L | NC_005301 |
| Canarypox virus | NC_005309 |
| Orfvirus | NC_005336 |
| Bovine papularstomatitis virus | NC_005337 |
| Mossman virus | NC_005339 |
| Bacteriophage PSP3 | NC_005340 |
| Burkholderia cepacia phage Bcep43 | NC_005342 |
| Enterobacteria phage Sf6 | NC_005344 |
| Bacteriophage VWB | NC_005345 |
| Lactobacillus johnsonii prophage Lj928 | NC_005354 |
| Lactobacillus johnsonii prophage Lj965 | NC_005355 |
| Bacteriophage 77 | NC_005356 |
| Bordetella phage BPP-1 | NC_005357 |
| Sulfolobus spindle-shaped virus Ragged Hills | NC_005360 |
| Sulfolobus spindle-shaped virus Kamchatka-1 | NC_005361 |
| Bordetella phage BMP-1 | NC_005808 |
| Bordetella phage BIP-1 | NC_005809 |
| Bacteriophage phiLC3 | NC_005822 |
| Acidianus filamentus virus 1 | NC_005830 |
| Human coronavirus NL63 | NC_005831 |
| Ambystoma tigrinum virus | NC_005832 |
| Enterobacteria phage T1 | NC_005833 |
| Agrotis segetum granulovirus | NC_005839 |
| Salmonella typhimurium bacteriophage ST104 | NC_005841 |
| Enterobacteria phage P1 | NC_005856 |
| Bacteriophage phiKO2 | NC_005857 |
| Bacteriophage T5 | NC_005859 |
| Porcine adenovirus A | NC_005869 |
| Pyrobaculum spherical virus | NC_005872 |
| Kakugo virus | NC_005876 |
| Vibriophage VP2 | NC_005879 |
| Staphylococcus phage K | NC_005880 |
| Ostreid herpesvirus 1 | NC_005881 |
| Burkholderia cenocepacia phage BcepMu | NC_005882 |
| Pseudomonas aeruginosa bacteriophage PaP2 | NC_005884 |
| Actinoplanes phage phiAsp2 | NC_005885 |
| Burkholderia cenocepacia phage BcepB1A | NC_005886 |
| Burkholderia cepacia complex phage BcepC6B | NC_005887 |
| Vibriophage VP5 | NC_005891 |
| Sulfolobus turreted icosahedral virus | NC_005892 |
| Bacteriophage phiAT3 | NC_005893 |
| Lymphocystis disease virus-isolate China | NC_005902 |
| Neodiprion sertifer nucleopolyhedrovirus | NC_005905 |
| Neodiprion lecontei NPV | NC_005906 |
| Frog virus 3 | NC_005946 |
| Bacteriophage phiMFV1 | NC_005964 |
| Maize fine streak virus | NC_005974 |
| Maize mosaic virus | NC_005975 |
| Simian adenovirus A | NC_006144 |
| Cercopithecine herpesvirus 15 | NC_006146 |
| Cercopithecine herpesvirus 8 | NC_006150 |
| Suid herpesvirus 1 | NC_006151 |
| Watermelon mosaic virus | NC_006262 |
| Sulfolobus tengchongensis spindle-shaped virus STSV1 | NC_006268 |
| Human herpesvirus 5 (wildtype strain Merlin) | NC_006273 |
| Rinderpest virus | NC_006296 |
| Bovine adenovirus A | NC_006324 |
| Bacteriophage 11b | NC_006356 |
| Peste-des-petits-ruminants virus | NC_006383 |
| Simian parainfluenza virus 41 | NC_006428 |
| Mokola virus | NC_006429 |
| Simian parainfluenza virus5 | NC_006430 |
| Sudan ebola virus | NC_006432 |
| Acanthamoeba polyphaga mimivirus | NC_006450 |
| Varroa destructor virus 1 | NC_006494 |
| Bacteriophage B3 | NC_006548 |
| Singapore grouper iridovirus | NC_006549 |
| Usutu virus | NC_006551 |
| Pseudomonas aeruginosa phage F116 | NC_006552 |
| Thermoproteus tenax spherical virus 1 | NC_006556 |
| Bacillus clarkii bacteriophage BCJA1c | NC_006557 |
| Getah virus | NC_006558 |
| Cercopithecine herpesvirus 2 | NC_006560 |
| Lactobacillus plantarum bacteriophage LP65 | NC_006565 |
| Human coronavirus HKU1 | NC_006577 |
| Pneumonia virus of mice J3666 | NC_006579 |
| Gallid herpesvirus 1 | NC_006623 |
| Cotesia congregata virus segment Circle 1 | NC_006633 |
| Cotesia congregata virus segment Circle 2 | NC_006634 |
| Cotesia congregata virus segment Circle 3 | NC_006635 |
| Cotesia congregata virus segment Circle 4 | NC_006636 |
| Cotesia congregata virus segment Circle 5 | NC_006637 |
| Cotesia congregata virus segment Circle 6 | NC_006638 |
| Cotesia congregata virus segment Circle 7 | NC_006639 |
| Cotesia congregata virus segment Circle 9 | NC_006641 |
| Cotesia congregata virus segment Circle 10 | NC_006642 |
| Cotesia congregata virus segment Circle 11 | NC_006643 |
| Cotesia congregata virus segment Circle 12 | NC_006644 |
| Cotesia congregata virus segment Circle 13 | NC_006645 |
| Cotesia congregata virus segment Circle 14 | NC_006646 |
| Cotesia congregata virus segment Circle 17 | NC_006648 |
| Cotesia congregata virus segment Circle 18 | NC_006649 |
| Cotesia congregata virus segment Circle 19 | NC_006650 |
| Cotesia congregata virus segment Circle 20 | NC_006651 |
| Cotesia congregata virus segment Circle 22 | NC_006653 |
| Cotesia congregata virus segment Circle 23 | NC_006654 |
| Cotesia congregata virus segment Circle 25 | NC_006655 |
| Cotesia congregata virus segment Circle 26 | NC_006656 |
| Cotesia congregata virus segment Circle 30 | NC_006657 |
| Cotesia congregata virus segment Circle 31 | NC_006658 |
| Cotesia congregata virus segment Circle 32 | NC_006659 |
| Cotesia congregata virus segment Circle 33 | NC_006660 |
| Cotesia congregata virus segment Circle 35 | NC_006661 |
| Cotesia congregata virus segment Circle 36 | NC_006662 |
| Bacteriophage S-PM2 | NC_006820 |
| Murine hepatitis virus strain JHM | NC_006852 |
| Simian adenovirus 1 | NC_006879 |
| Cyanophage P-SSP7 | NC_006882 |
| Cyanophage P-SSM2 | NC_006883 |
| Cyanophage P-SSM4 | NC_006884 |
| Lactobacillus plantarum bacteriophage phiJL-1 | NC_006936 |
| Bacteriophage phiJL001 | NC_006938 |
| Bacteriophage KS7 | NC_006940 |
| Taro vein chlorosis virus | NC_006942 |
| Mint virus 1 | NC_006944 |
| Bacillus thuringiensis phage GIL16c | NC_006945 |
| Karshi virus | NC_006947 |
| Salmonella typhimurium bacteriophage ES18 | NC_006949 |
| Listonella pelagia phage phiHSIC | NC_006953 |
| Muledeerpox virus | NC_006966 |
| Vaccinia virus | NC_006998 |
| Macaca fuscata rhadinovirus | NC_007016 |
| Streptococcus thermophilus bacteriophage 2972 | NC_007019 |
| Tupaia rhabdovirus | NC_007020 |
| Staphylococcus phage Twort | NC_007021 |
| Aeromonas phage 31 | NC_007022 |
| Enterobacteria phage RB43 | NC_007023 |
| Xanthomonas campestris pv. pelargonii phage Xp15 | NC_007024 |
| Feline coronavirus | NC_007025 |
| Microplitis demolitor bracovirus segment G | NC_007034 |
| Microplitis demolitor bracovirus segment H | NC_007035 |
| Microplitis demolitor bracovirus segment J | NC_007036 |
| Microplitis demolitor bracovirus segment K | NC_007037 |
| Microplitis demolitor bracovirus segment M | NC_007038 |
| Microplitis demolitor bracovirus segment N | NC_007039 |
| Microplitis demolitor bracovirus segment L | NC_007040 |
| Microplitis demolitor bracovirus segment I | NC_007041 |
| Microplitis demolitor bracovirus segment O | NC_007044 |
| Bacteriophage PT1028 | NC_007045 |
| Bacteriophage 66 | NC_007046 |
| Bacteriophage 187 | NC_007047 |
| Bacteriophage 69 | NC_007048 |
| Bacteriophage 53 | NC_007049 |
| Bacteriophage 85 | NC_007050 |
| Bacteriophage 2638A | NC_007051 |
| Bacteriophage 42e | NC_007052 |
| Bacteriophage 3A | NC_007053 |
| Bacteriophage 47 | NC_007054 |
| Bacteriophage 37 | NC_007055 |
| Bacteriophage EW | NC_007056 |
| Bacteriophage 96 | NC_007057 |
| Bacteriophage ROSA | NC_007058 |
| Bacteriophage 71 | NC_007059 |
| Bacteriophage 55 | NC_007060 |
| Bacteriophage 29 | NC_007061 |
| Bacteriophage 52A | NC_007062 |
| Bacteriophage 88 | NC_007063 |
| Bacteriophage 92 | NC_007064 |
| Bacteriophage X2 | NC_007065 |
| Bacteriophage G1 | NC_007066 |
| Phytophthora endorna virus 1 | NC_007069 |
| Burkholderia pseudomallei phage phi52237 | NC_007145 |
| Vibriophage VP4 | NC_007149 |
| Chrysodeixis chalcites nucleopolyhedrovirus | NC_007151 |
| Bacteriophage SH1 | NC_007217 |
| Bacteriophage JK06 | NC_007291 |
| Emiliania huxleyi virus 86 | NC_007346 |
| Trichoplusia ni SNPV virus | NC_007383 |
| Acidianus two-tailed virus | NC_007409 |
| Shallot yellow stripe virus | NC_007433 |
| Breda virus | NC_007447 |
| Grapevine leaf roll-associated virus 2 | NC_007448 |
| Enterobacteria phage L17 | NC_007449 |
| Enterobacteria phage PR3 | NC_007450 |
| Enterobacteria phage PR4 | NC_007451 |
| Enterobacteria phage PR5 | NC_007452 |
| Enterobacteria phage PR772 | NC_007453 |
| J-virus | NC_007454 |
| Coliphage K1F | NC_007456 |
| Bacillus anthracis phage Cherry | NC_007457 |
| Bacillus anthracis phage Gamma | NC_007458 |
| Burkholderia cepacia phage Bcep176 | NC_007497 |
| Bacteriophage Lc-Nu | NC_007501 |