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. 2006 Nov 23;2(1):101–106. doi: 10.4172/1747-0862.1000020

Table 3.

Genotype and allelea frequencies in 18 populations from lowlands and highlands of Nepal

Population n Genotype
TNF (rs1800629) FCGRIIA (rs1801274)
G GG GA AA pb C CC CT TT pb
Baram 38 1.00 1.00 N.Ac 0.37 0.14 0.46 0.40 0.07
Chantyal 23 0.89 0.79 0.21 1.00 0.50 0.25 0.5 0.25 0.08
Chepangd 27 1.00 1.00 N.A 0.20 0.04 0.32 0.62 1.00
Danuwar 30 0.70 0.49 0.42 0.09 0.69 0.05 0.10 0.90 1.00
Dhimal 22 0.89 0.79 0.21 1.00 0.27 0.08 0.20 0.72 0.63
Dura 35 0.96 0.92 0.08 1.00 0.31 0.10 0.43 0.47 1.00
Ghale 25 0.98 0.96 0.04 1.00 0.16 0.13 0.70 1.00
Gurung 46 0.93 0.86 0.14 1.00 0.41 0.17 0.48 0.35 0.23
High Caste Newar 29 1.00 1.00 N.A 0.52 0.27 0.50 0.23 1.00
Kumal 25 0.88 0.77 0.21 0.02 0.29 0.18 0.03 0.30 0.67 1.00
Magar 45 0.94 0.88 0.11 0.01 0.11 0.21 0.05 0.33 0.62 0.38
Majhi Bote 27 0.85 0.72 0.26 0.02 0.45 0.19 0.04 0.31 0.65 0.19
Newar 50 0.99 0.98 0.02 1.00 0.33 0.11 0.44 0.45 0.75
Sherpa 24 0.75 0.56 0.38 0.06 0.59 0.23 0.05 0.35 0.60 0.56
Tamang 48 0.97 0.94 0.06 1.00 0.26 0.07 0.38 0.55 1.00
Thakali 29 0.93 0.86 0.13 0.01 0.10 0.31 0.09 0.43 0.48 1.00
Tharu 34 0.85 0.72 0.25 0.03 0.12 0.25 0.06 0.38 0.56 0.39
Wambule 29 1.00 1.00 N.A 0.16 0.03 0.26 0.71 0.11
a

Frequency of the protective alleles G and C at TNF and FCGRIIA, respectively

b

p values after testing for departure from Hardy-Weinberg equilibrium (random association of alleles in diploid individuals)

c

N.A. not applicable

d

The populations in bold live in the malarial lowlands of Nepal. The remaining groups live in regions of high altitudes, which are malaria-free