Table 1. Primer sequences used for qRT-PCR.
Gene GenBank No. |
Primer Sequence (5′-3′) | Amplicon (bp) |
Tm (°C) |
---|---|---|---|
Claudin-1 NM_021101 | |||
Forward | GAA GTG CTT GGA AGA CGA TGA G | 190 | 56 |
Reverse | GCC CAG CCA GTG AAG AAG G | ||
| |||
Claudin-5 NM_003277 | |||
Forward | CTC TGC TGG TTC GCC AAC AT | 87 | 57 |
Reverse | CAG CTC GTA CTT CTG CGA CA | ||
| |||
E-selectin NM_000450 | |||
Forward | TGA GAC AGA GGC AGC AGT G | 199 | 57 |
Reverse | CCG TGG AGG TGT TGT AAG AC | ||
GAPDH BC025925 | |||
Forward | AGT TAG CCG CAT CTT CTT TTG C | 96 | 57 |
Reverse | CAA TAC GAC CAA ATC CGT TGA CT | ||
| |||
ICAM-3 NM_002162 | |||
Forward | AGC GGC AGT TAC CAT GTT AGG G | 146 | 58 |
Reverse | GGC TTT ATT GGT GCG GAA TCT GAG | ||
| |||
Occludin DQ892423 | |||
Forward | TCC AGA GTC TTC CTA TAA ATC CAC | 106 | 57 |
Reverse | ACC ACC GCT GCT GTA ACG | ||
| |||
PECAM NM_000442 | |||
Forward | GCA GTC TTC ACT CTC AGG ATG | 143 | 57 |
Reverse | GGC AGG CTC TTC ATG TCA AC | ||
| |||
VCAM-1 BC068490 | |||
Forward | TGC TGC TCA GAT TGG AGA CTC | 113 | 55 |
Reverse | TCC TCA CCT TCC CGC TCA G | ||
| |||
ZO1 NM_003257 | |||
Forward | GAA TGA TGG TTG GTA TGG TGC G | 191 | 60 |
Reverse | TCA GAA GTG TGT CTA CTG TCC G | ||
| |||
WNV (ENV) NC_009942 | |||
Forward | CAG ACC ACG CTA CGG CG | 112 | 60 |
Reverse | CTA GGG CCG CGT GGG | ||
Probe | TCT GCG GAG AGT GCA GTC TGC GAT |