Table 4.
Novel zebrafish miRNAs. miRNAs identified in this study, their level of conservation and corresponding miRNA families.
| miRNA ID | miRNA sequence | Conservation | miRNA family | miRDeep prediction | Ensembl prediction |
| miR_1 | AACAGTAAGAGTTTATGTGCTG | Non-conserved | - | √ | No |
| miR _2 | CGGTGCAGGACTCCGCGGCTC | Non-conserved | - | √ | No |
| miR _3 | AAGTGGCCTCTAAAAGTCTA | Non-conserved | - | √ | No |
| miR _4 | TAATACTGCCTGGTAATGCCAT | Conserved | miR-429 | √ | √ |
| miR _5 | ATCTCAGGTTCGTCAGCCCATG | Conserved | miR-1388 | √ | √ |
| miR _6 | GGCTTGTTTTAAGTTGCCTGCG | Conserved | miR-1788 | √ | √ |
| miR _7 | TTACAGGCTATGCTAATCTATG | Non-conserved | - | √ | No |
| miR _8 | AAGGTCCAACCTCACATGTCC | Non-conserved | - | √ | No |
| miR _9 | TGATTGTTTGTATCAGCTGTGT | Non-conserved | - | √ | No |
| miR _10 | TAGGGGTATGATTCTCGC | Non-conserved | - | √ | No |
| miR _11 | TAGGTAGTTTGATGTTGTTGGG | Conserved | miR-196 | √ | √ |
| miR _12 | CGGCCCGTCCGGTGCGCTCGGAT | Non-conserved | - | √ | No |
| miR _13 | TCACACCTACAATCCCTGGCA | Non-conserved | - | √ | No |
| miR _14 | AAAGTGAAAGGTGACTGAGAC | Non-conserved | - | √ | No |
| miR _15 | TAGGTAGTTTTATGTTGTTGGG | Conserved | miR-196 | √ | √ |
| miR _16 | AGCAGCATTGTACAGGGCTTT | Conserved | miR-107 | √ | √ |
| miR _17 | GTATGTGCCCTTGGACTACATT | Conserved | miR-455 | No | √ |
| miR _18 | TATGTGTGTATCAATTGTGTGAAA | Non-conserved | - | √ | No |
| miR_19 | GTAATGCTTCGACTGATTGGTG | Non-conserved | - | √ | No |
| miR _20 | AGATTGGGGTGAGTTAGGGTG | Non-conserved | - | √ | No |
| miR _21 | AGCTACATCTGAATACTGGGTCA | Conserved | miR-222 | √ | √ |
| miR _22 | CCTCTCTGTGCTGCCATTTGGGAC | Non-conserved | - | √ | No |
| miR _23 | ATGATTCGACTCATATGGTG | Non-conserved | - | √ | No |
| miR _24 | AGCTCGTGTCCCAAGGCGCCT | Non-conserved | - | √ | No |
| miR_25 | TCGTACCGTGAGTAATAGTGCA | Conserved | miR-126 | No | √ |
The novel miRNAs were numbered sequentially from 1 to 25.