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. 2009 Apr 21;4(4):e5286. doi: 10.1371/journal.pone.0005286

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This is an open-access article distributed under the terms of the Creative Commons Public Domain declaration which stipulates that, once placed in the public domain, this work may be freely reproduced, distributed, transmitted, modified, built upon, or otherwise used by anyone for any lawful purpose.

This is an open-access article distributed under the terms of the Creative Commons Public Domain declaration, which stipulates that, once placed in the public domain, this work may be freely reproduced, distributed, transmitted, modified, built upon, or otherwise used by anyone for any lawful purpose.

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The 9,127 N. crassa gene set was classified into five LS groups according to presence/absence of homologs in defined taxonomical units at the given percent protein identity threshold level (25%, 30% or 35%). From the top, the proportion of genes in N. crassa-orphan, Pezizo-specific, Ascomycota-core, Dikarya-core, Euk/Prok-core, and Others LS groups are shown. Note that the number of genes in N. crassa-orphans and Pezizo-specific groups increases and the threshold level rises from 25% to 35%.