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. 2009 Mar 12;37(9):2830–2840. doi: 10.1093/nar/gkp103

Table 1.

Bypass efficiency of 8-oxoG by pols δ and η

Yeasta
Humanb,c Mouseb
δexo+
δexo−
η
η η
RPA/RFC/PCNA + + +
Bypass (%)d
    3′-CCGATT 8.9 25 4.8 24 47 54 24 17
    3′-CCGoATT 1.3 4.1 1.5 5.9 62 69 36 31
Relative bypass (%) 15 16 31 25 130 130 150 180
Switch No No No No Yes Yes No No
Bypass (%)
    3′-TTGGG 71 75 34 23
    3′-TTGoGG 18 23 86 57
Relative bypass (%) 25 31 250 250
Switch No No Yes Yes

aEfficiency measurements made using 70-mer template with streptavidin blocked ends (see ‘Materials and Methods’ section).

bEfficiency measurements made using 45-mer template (see ‘Materials and Methods’ section).

cBypass efficiency measured in three other template sequence contexts was 3′ … CGoATC … = 220%; 3′- … CAGoTC … = 180%; 3′- … CAGoTT … = 180%.

dExperiments depicted in Figures 1 and 2 were quantified and the bypass amount on each template calculated as previously described (39,41). Relative bypass is the amount of 8-oxoG bypass compared to undamaged DNA. Switch is defined as a change from lower to higher termination probability when comparing values at the 8-oxoG and next undamaged base.