Skip to main content
. 2009 Mar 20;37(9):3083–3093. doi: 10.1093/nar/gkp189

Table 2.

The length and structure of 20 characterized A. thaliana MIRNA genes

No. A. thaliana MIRNA gene Chr. Position (strand) Length(bp) Number of introns(length) Mature miRNA and miRNA* within the gene (exon number)
1 156a II 10684143 – 10681036 a (–) 3108 3 (341, 1985, 92) II
2 156c IV 15415879 – 15413300b (–) 2580 3 (980, 490, 164) I
3 157c III 6244832 – 6243836a (–) 997 1 (231) I
4 158a III 3366558 – 3366024 (–) 535 1 (117) I
5 159a I 27717361 – 27716554a (–) 808 0 I
6 160a II 16346931 – 16348964a (+) 2034 1 (1151) I
7 160b IV 9888812 – 9889189a (+) 378 0 I
8 161 I 17829287 – 17829985a (+) 699 1 (128) I
9 164c V 9852487 – 9853318c,d (+) 832 0 I
10 166a II 19183029 – 19184141a (+) 1113 1 (473) I
11 166b III 22932977 – 22934097 a (+) 1121 2 (95, 86) I
12 167a III 8108028 – 8108629b,e (+) 602 0 I
13 169f III 4805955 – 4805221 (–) 735 0 I
14 171b I 3961705 – 3960931a (–) 775 1 (86) I
15 171c I 22934092 – 22933232a (–) 861 1 (207) I
16 172a II 11950688 – 11948592a (–) 2097 2 (148, 694) I
17 172b V 1188917 – 1187501a,f (–) 1417 3 (117, 199, 280) III
18 172e V 24005296 – 24006112a (+) 817 0 I
19 319b V 16678195 – 16677323a (–) 873 0 I
20 393a II 16659105 – 16659650 (+) 546 0 I

All introns are of U2-type. Source of the 5′ end sequence: a, Xie et al. (4); b, TAIR; c, 5′ end of the miRNA precursor sequence established by us is the same as described by Nicovics et al. (23). Source of the longest 3′ end sequence: d, Nicovics et al. (23); e, TAIR; f, Aukerman and Sakai (20).