Table 7.
Spacer sequence matches between S. solfataricus strains P2 and P1 and viruses, plasmids and chromosomes. Matches of ATV and pIT3 to strain P1 are additional to those found for strain P2B, as illustrated in Figure 1. Symbol: * = an exclusive match to SIRV2. Literature references to the viral and plasmid sequences are given in the text for strain P2, and see Prato et al. 2006 regarding the pIT3 sequence.
| Virus/plasmid/ chromosome matches | Spacer match (mismatch) | Sense | Function |
| S. solfataricus P2 | |||
| ATV | |||
| ORF61 | 35 (1) | S | |
| ORF127 | 38 (0) | S | |
| ORF145 | 39 (0) | A | Virionprotein |
| ORF192 | 37 (0) | A | ORF198, pING1 |
| ORF326b | 39 (1) | A | ParBc |
| ORF529 | 34 (0) | S | AAA-ATPase |
| ORF545 | 35 (2) | S | Membrane protein |
| ORF618 | 40 (0) | S | AAA-ATPase/virionprotein |
| ORF710 | 39 (0) | A | |
| ORF892 | 28 (1) | S | VWA-domainprotein |
| ORF892 | 38 (0) | S | VWA-domainprotein |
| SIRV1/2 | |||
| ORF98 | 23 (0) | S | |
| ORF121* | 31 (0) | A | Hollidayjunctionresolvase |
| ORF134 | 31 (0) | S | Virionprotein |
| ORF268 | 41 (5) | S | |
| ORF356 | 29 (1) | A | Glycosyltransferase |
| ORF510 | 40 (2) | A | |
| STIV | |||
| A109 | 27 (0) | S | |
| C557 | 23 (0) | A | |
| AFVs | |||
| ORF267 AFV6 | 29 (2) | S | |
| ORF96 AFV7 | 25 (1) | S | |
| ORF593 AFV8 | 36 (0) | A | AFV-typehelicase |
| pNOB8 | |||
| ORF315 | 40 (3) | A | ParA |
| ORF406 | 25 (1) | S | IS element |
| ORF1025 | 38 (2) | S | TrbE family |
| Chromosome | |||
| SSO1736 | 40 (5) | A | IS element |
| (S. solfataricus) | |||
| AF1948 | 32 (3) | A | |
| (A fulgidus) | |||
| S. solfataricus P1 | |||
| ATV | |||
| ORF653 | 36 (2) | S | Virionprotein |
| pIT3 | |||
| ORF80 | 35 (0) | S | CopG |