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Validation of flcDNAs and FgeneSH-Predicted Genes.
(A) FgeneSH-predicted maize genes in different groups.
(B) Numbers of retained and filtered reads in 16 merged lanes of mRNA-seq reads using different mapping quality (MQ) scores.
(C) Total lengths of transcribed nucleotides by adding up de novo exons using different MQ scores.
(D) to (G) Percentages and numbers of validated flcDNAs at gene, exon, and base level.
(H) Numbers of validated non-TE genes in different groups.
