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. 2009 May 29;284(22):15317–15324. doi: 10.1074/jbc.M901368200

TABLE 1.

Alanine scanning of mNop5p activity

Mutant KD Krela ΔΔ G p value (t test)b
nm kcal/mol
Wild typec 76 ± 6 1
K32A 190 ± 31 2.5 −0.54 0.0033
E44A 87 ± 37 1.1 −0.06 0.6380
K47A 71 ± 17 0.93 0.04 0.6560
E100A 140 ± 17 1.8 −0.35 0.0035
E104A 91 ± 15 1.2 −0.11 0.1831
F107A 83 ± 12 1.1 −0.06 0.4173
N112A 200 ± 62 2.6 −0.57 0.0261
K131A 64 ± 8 0.84 0.10 0.1062
D253A 120 ± 9 1.6 −0.28 0.0021
K265A 62 ± 11 0.81 0.12 0.1251
E279A 210 ± 41 2.7 −0.59 0.0050
S286A 600 ± 60 7.9 −1.22 0.0001
T287A 230 ± 6 3.0 −0.65 0.0001
Q289A 1500 ± 81 20 −1.77 0.0001
R299A 57 ± 11 0.75 0.17 0.0584
K306A 87 ± 20 1.1 −0.06 0.4132
N320A 140 ± 3 1.8 −0.35 0.0001
W324A 150 ± 13 2.0 −0.41 0.0009
Q326A 280 ± 9 3.7 −0.78 0.0001
R327A 50 ± 6 0.66 0.25 0.0061
K329A 210 ± 3 2.8 −0.61 0.0001
R332A 1600 ± 240 21 −1.80 0.0004
K337A 360 ± 23 4.7 −0.92 0.0001
F347A 760 ± 100 10 −1.36 0.0003
E350A 150 ± 12 2.0 −0.41 0.0007
E354A 140 ± 24 1.8 −0.35 0.0110
E361A 110 ± 23 1.4 −0.20 0.0684
R363A 400 ± 34 5.3 −0.99 0.0001
K365A 130 ± 15 1.7 −0.31 0.0044
E366A 260 ± 37 3.4 −0.72 0.0010
K368A 130 ± 3 1.7 −0.31 0.0002
a

Krel = KD,mutant/KD,wild type.

b

p values from a two-tailed unpaired t test. The mutations to mNop5p that result in a statistically significant change in binding affinity relative to wild type are listed in bold type (95% confidence level).

c

Wild type refers to the mNop5p protein that contains a deletion of the coiled-coil domain of Nop5, preventing its dimerization.