Table 4.
H. bacteriophora distinct ESTs similar to C. elegans genes involved in dauer larval development, dauer entry, and dauer exit
| H. bacteriophora distinct EST | Matching C. elegans gene | Description | BLASTx E value | Alignmenta | % similarity |
| Dauer larval development | |||||
| Contig58 | WBGene00018294 | atgr-18 WD40 repeat-containing protein | 6e-70 | (55–624)/625; (16–208)/394 | 87% |
| Contig349 | WBGene00010882 | atgr-7 E1 ubiquitin-activating-like enzyme | 4e-85 | (3–743)/743; (373–609)/647 | 77% |
| EX010274 | WBGene00010882 | atgr-7 E1 ubiquitin-activating-like enzyme | 4e-44 | (31–597)/601; (2–197)/647 | 67% |
| Contig1114 | WBGene00000247 | bec-1 beclin (human autophagy) homolog | 7e-33 | (214-747)/748; (2–181)/375 | 62% |
| EX916779 | WBGene00000247 | bec-1 beclin (human autophagy) homolog | 6e-10 | (215–442)/444; (2–79)/375 | 59% |
| Contig1259 | WBGene00004860 | sma-6 Activin receptor | 5e-15 | (72–518)/693; (505–634)/636 | 54% |
| Contig1603 | WBGene00006786 | unc-51 serine/threonine protein kinase | 1e-122 | (222–932)/1459; (39–275)/856 | 81% |
| ES740745 | WBGene00006786 | unc-51 serine/threonine protein kinase | 2e-35 | (101–460)/552; (1–120)/856 | 68% |
| FF681332 | WBGene00006786 | unc-51 serine/threonine protein kinase | 4e-63 | (41–502)/503; (671–833)/856 | 83% |
| Contig2206 | WBGene00004736 | sca-1 E1–E2 ATPases | 3e-77 | (2–460)/608; (844–996)/1004 | 95% |
| EX012478 | WBGene00004736 | sca-1 E1–E2 ATPases | 5e-89 | (37–597)/599; (1–187)/1004 | 94% |
| FF679293 | WBGene00004736 | sca-1 E1–E2 ATPases | 1e-50 | (1–399)/430; (780–912)/1004 | 81% |
| ES739311 | WBGene00006600 | tph-1 tryptophan hydroxylase | 2e-63 | (12–587)/587; (23–217)/532 | 81% |
| ES741003 | WBGene00000090 | age-1 phosphatidylinositol 3-kinase | 3e-09 | (30–128)/497; (1113–1145)/1146 | 85% |
| EX909983 | WBGene00000903 | daf-7 transforming growth factor beta proteins | 1e-39 | (9–491)/643; (190–350)/350 | 65% |
| FF678376 | WBGene00006527 | tax-6 calcineurin A | 3e-56 | (2–334)/348; (358–468)/597 | 95% |
| FF681873 | WBGene00003965 | pdk-1 3-phosphoinositide-dependent kinase 1 | 5e-22 | (9–221)/244; (517–587)/636 | 79% |
| Dauer entry | |||||
| Contig710 | WBGene00004789 | sgk-1 serine/threonine protein kinase | 1e-103 | (1–720)/1010; (220–459)/463 | 84% |
| EX913794 | WBGene00004789 | sgk-1 serine/threonine protein kinase | 6e-68 | (20–664)/664; (17–231)/463 | 74% |
| ES739212 | WBGene00000102 | akt-1 serine/threonine kinase | 5e-60 | (128–526)/630; (1–132)/546 | 89% |
| Dauer exit | |||||
| Contig933 | WBGene00003831 | nuo-1 NADH-ubiquinone oxidoreductase | 1e-108 | (9–659)/676; (1–219)/479 | 90% |
| EX007842 | WBGene00003831 | nuo-1 NADH-ubiquinone oxidoreductase | 7e-87 | (3–488)/645; (317–478)/479 | 97% |
a. The alignment is presented in the following format: (H. bacteriophora EST start coordinate – H. bacteriophora EST end coordinate)/H. bacteriophora length; (C. elegans start coordinate – C. elegans end coordinate)/C. elegans length.