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. 2009 Mar 30;77(6):2320–2329. doi: 10.1128/IAI.01507-08

TABLE 1.

Alignment of ISL 929, ISL 1373, and Salp 13 predicted proteinsa

Protein Sequence Position
ISL 929 MQLALFMIMVTFTLLSCEEQSEASPDIFGVMKYLPEDCKVNIKKQIEDKCSGNPYQPQLL 60
Salp 13 MQLTLFIVIVTFTHLSCEVQSDSNPLISGKMEKLPQDCKDTLIQQMRNKCGESPFQTQLV 60
ISL 1373 MQLALFLVVATFIYVSCGEKSESGLVIYKEFESLQEGCKQKLRDEMEQRCSEHPFQPELV 60
***:**:::.**:**:*::. *:: *:.** .: .::.::*. *:*.:*:
ISL 929 EVKDCTIICGDWHDNGVTKAITRHIINLKDGTPCGHSRVCIKGKCFDTCQMTFV------- 114
Salp 13 EVKDCSFACGEWHNNGQTMGTSRQTTNLKDGTSCGYRKICVGGHCVQQCLVDFA------- 114
ISL 1373 EVLQCKFKCGNEHSNGKTLLISGQYINLNDGTPCGPNKICIDGQCVPRCSMPFVKGLKGRI 121
**:*.: **: *.** *:: **:***.** ::*: *:*. * : *.
a

Asterisks designate identities, colons indicate conserved substitutions, and periods indicate semiconserved substitutions. The region complementary to the dsRNA is underlined.