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Identification of true integration sites
| Sample | No. of duplicated sequences | No. of unique sequences witha:
|
Total | |
|---|---|---|---|---|
| Unique locations | Multiple/unclear locations | |||
| G0 | 212 | 180 | 9 | 401 |
| Stim | 178 | 318 | 24 | 520 |
Unique sequences from the integration site sequences with completely processed LTRs were mapped onto the genome. Sequences with a unique genomic location (Unique locations) were further analyzed for the characterization of virus integration sites.
