Table 2.
Genes modulated as a consequence of CD146 downmodulation
Symbol | Accession number | Fold change | P value (t test) |
DNA microarray | |||
LIPG | [GenBank:NM_006033] | -6.75 | 0.02749 |
MCAM | [GenBank:NM_006500] | -3.61 | 0.00084 |
FPR1 | [GenBank:NM_002029] | -2.88 | 0.03159 |
CYP1B1 | [GenBank:NM_000104] | -2.73 | 0.03208 |
FN1 | [GenBank:NM_212475] | -2.48 | 0.00657 |
SORCS2 | [GenBank:NM_020777] | -2.17 | 0.0314 |
FLJ20160 | [GenBank:NM_017694] | -1.74 | 0.01431 |
LTBP1 | [GenBank:NM_206943] | -1.72 | 0.03606 |
HES1 | [GenBank:NM_005524] | -1.7 | 0.04315 |
AIM1 | [GenBank:NM_001624] | -1.63 | 0.00758 |
MFAP2 | [GenBank:NM_002403] | -1.58 | 0.04437 |
HIPK2 | [GenBank:NM_022740] | -1.55 | 0.00781 |
CALD1 | [GenBank:NM_033138] | -1.51 | 0.0113 |
NAV1 | [GenBank:NM_020443] | -1.5 | 0.00481 |
NFIC | [GenBank:NM_005597] | -1.5 | 0.0275 |
TGFBI | [GenBank:NM_000660] | -1.85* | 0.03459 |
TRIM59 | [GenBank:NM_173084] | -1.76* | 0.01626 |
NFAT5 | [GenBank:NM_138714] | -1.51* | 0.04496 |
APCDD1L | [GenBank:NM_153360] | -2.38** | 0.01035 |
GARNL4 | [GenBank:NM_001100398] | -1.96** | 0.04209 |
PCMTD1 | [GenBank:NM_052937] | -1.59** | 0.0362 |
Multiplex quantitative RT-PCR | |||
KALRN | [GenBank:NM_003947] | -10 | 0.02973 |
PREX1 | [GenBank:NM_020820] | -8.93 | 0.01711 |
VAV1 | [GenBank:NM_005428] | -7.94 | 0.00688 |
FGD4 | [GenBank:NM_139241] | -4.63 | 0.00318 |
RHOV | [GenBank:NM_133639] | -4.03 | 0.03116 |
CCL5 | [GenBank:NM_002985] | -3.88 | 0.00536 |
ITGB3 | [GenBank:NM_000212] | -3.61 | 0.00187 |
CXCL16 | [GenBank:NM_022059] | -2.92 | 0.00252 |
THBS1 | [GenBank:NM_003246] | -2.66 | 0.01279 |
CXCR4 | [GenBank:NM_001008540] | -2.21 | 0.00259 |
ITGB4 | [GenBank:NM_001005731] | -2.15 | 0.01068 |
CD44 | [GenBank:NM_000610] | -1.92 | 0.00141 |
ITGA2 | [GenBank:NM_002203] | -1.86 | 0.00191 |
ROCK2 | [GenBank:NM_004850] | -1,80 | 0.00004 |
ITGA6 | [GenBank:NM_000210] | -1.63 | 0.00274 |
VIM | [GenBank:NM_003380] | -1.45*** | 0.04761 |
ARHGEF11 | [GenBank:NM_198236] | 1.67 | 0.00288 |
BCL7A | [GenBank:NM_001024808] | 1.69 | 0.02473 |
DEF6 | [GenBank:NM_022047] | 2.05 | 0.00946 |
TNK2 | [GenBank:NM_005781] | 2.18 | 0.00222 |
CXCL10 | [GenBank:NM_001565] | 2.51 | 0.03645 |
*Not validated by quantitative RT-PCR. **Quantitative RT-PCR not available.***Observed only with the TI6194 cell line.